Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | C1H87_RS05980 | Not Available | Negative | 1451100 - 1452335 | 46911.6 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | C1H87_RS05985 | Not Available | Positive | 1452344 - 1453597 | 47458.3 |
| glycerophosphodiester phosphodiesterase family protein | C1H87_RS05990 | Not Available | Negative | 1453594 - 1454421 | 31716.1 |
| hypothetical protein | C1H87_RS05995 | Not Available | Negative | 1454479 - 1455387 | 34994.9 |
| dinb family protein | C1H87_RS06000 | Not Available | Negative | 1455392 - 1455880 | 18886.6 |
| sterol desaturase family protein | C1H87_RS06005 | Not Available | Negative | 1456003 - 1456839 | 32224.7 |
| ykgj family cysteine cluster protein | C1H87_RS06010 | Not Available | Negative | 1456863 - 1457354 | 19255.2 |
| class i sam-dependent methyltransferase | C1H87_RS06015 | Not Available | Positive | 1457479 - 1458180 | 26195.4 |
| tonb-dependent receptor | C1H87_RS06020 | Not Available | Negative | 1458267 - 1460006 | 65326.0 |
| tetratricopeptide repeat protein | C1H87_RS06025 | Not Available | Negative | 1460079 - 1463099 | 116529.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
