Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | C1H87_RS23720 | Not Available | Positive | 1423568 - 1423654 | 2915.06 |
| t9ss type a sorting domain-containing protein | C1H87_RS23725 | Not Available | Positive | 1423931 - 1424449 | 19111.6 |
| 30s ribosomal protein s21 | C1H87_RS05885 | Not Available | Negative | 1424611 - 1424805 | 7625.44 |
| alpha-amylase | C1H87_RS05890 | Not Available | Negative | 1424888 - 1426294 | 53286.1 |
| acyl-coa dehydrogenase family protein | C1H87_RS05895 | Not Available | Negative | 1426583 - 1427752 | 43710.5 |
| comea family dna-binding protein | C1H87_RS05900 | Not Available | Negative | 1427934 - 1428812 | 34110.5 |
| alanine/glycine:cation symporter family protein | C1H87_RS05905 | Not Available | Negative | 1428822 - 1430423 | 57075.3 |
| potassium channel family protein | C1H87_RS05910 | Not Available | Negative | 1430532 - 1431572 | 38442.0 |
| pspc domain-containing protein | C1H87_RS05915 | Not Available | Negative | 1431663 - 1431890 | 9011.31 |
| duf2851 family protein | C1H87_RS05920 | Not Available | Negative | 1432042 - 1433316 | 49731.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
