Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | C1H87_RS05675 | Not Available | Positive | 1374266 - 1374643 | 13635.1 |
| helix-turn-helix transcriptional regulator | C1H87_RS05680 | Not Available | Positive | 1374753 - 1375445 | 27064.7 |
| mosc domain-containing protein | C1H87_RS05685 | Not Available | Positive | 1375503 - 1376138 | 24340.2 |
| dead/deah box helicase | C1H87_RS05690 | Not Available | Positive | 1376181 - 1377422 | 46413.4 |
| cupin domain-containing protein | C1H87_RS05695 | Not Available | Positive | 1377435 - 1377938 | 19097.4 |
| hypothetical protein | C1H87_RS05700 | Not Available | Negative | 1377935 - 1378348 | 15462.8 |
| rna polymerase sigma factor | C1H87_RS05705 | Not Available | Negative | 1378329 - 1378916 | 23043.6 |
| duf6249 domain-containing protein | C1H87_RS05710 | Not Available | Positive | 1379057 - 1379410 | 12952.3 |
| yip1 family protein | C1H87_RS05715 | Not Available | Positive | 1379508 - 1380176 | 25148.5 |
| m15 family metallopeptidase | C1H87_RS05720 | Not Available | Negative | 1380184 - 1380849 | 26013.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
