Flavivirga eckloniae str. ECD14

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavivirga

Description

Flavivirga eckloniae strain ECD14 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This organism thrives optimally at a temperature of 29°C, placing it within the mesophilic temperature range, which is conducive to its growth in moderate environmental conditions. Flavivirga eckloniae is distinguished by its genomic structure, possessing a single replicon, which is indicative of its genetic organization. Additionally, this strain is non-spore-forming, suggesting that it relies on other mechanisms to survive adverse conditions instead of forming spores, a trait common in some bacterial species. The accession number for Flavivirga eckloniae str. ECD14 is NZ_CP025791.1, which can be used to locate its genomic information in biological databases. From an ecological perspective, the characteristics of Flavivirga eckloniae str. ECD14 suggest it may play a role in various environments where aerobic conditions prevail, particularly those with moderate temperatures. Its non-motile nature may indicate a lifestyle that is influenced by its immediate surroundings, potentially leading to interactions with other microorganisms or substrates in its habitat. These traits collectively highlight the ecological niche that Flavivirga eckloniae occupies and its potential contributions to microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavivirga
SpeciesFlavivirga eckloniae
StrainECD14

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Ecklonia
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavivirga eckloniae strain ECD14 chromosome, complete genome.

Gene Summary

Adenine Count

1875697 bp

Thymine Count

1867130 bp

Guanine Count

959621 bp

Cytosine Count

962910 bp

Genome Length

5665358 bp

Protein-coding Genes

4573 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
voc family proteinC1H87_RS05675Not AvailablePositive1374266 - 137464313635.1
helix-turn-helix transcriptional regulatorC1H87_RS05680Not AvailablePositive1374753 - 137544527064.7
mosc domain-containing proteinC1H87_RS05685Not AvailablePositive1375503 - 137613824340.2
dead/deah box helicaseC1H87_RS05690Not AvailablePositive1376181 - 137742246413.4
cupin domain-containing proteinC1H87_RS05695Not AvailablePositive1377435 - 137793819097.4
hypothetical proteinC1H87_RS05700Not AvailableNegative1377935 - 137834815462.8
rna polymerase sigma factorC1H87_RS05705Not AvailableNegative1378329 - 137891623043.6
duf6249 domain-containing proteinC1H87_RS05710Not AvailablePositive1379057 - 137941012952.3
yip1 family proteinC1H87_RS05715Not AvailablePositive1379508 - 138017625148.5
m15 family metallopeptidaseC1H87_RS05720Not AvailableNegative1380184 - 138084926013.1

Displaying genes 1141 – 1150 of 4631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.