Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | C1H87_RS05520 | Not Available | Negative | 1346880 - 1347308 | 16775.6 |
| signal recognition particle-docking protein ftsy | C1H87_RS05525 | Not Available | Negative | 1347732 - 1348685 | 34539.5 |
| duf4295 domain-containing protein | C1H87_RS05530 | Not Available | Negative | 1348891 - 1349043 | 5552.92 |
| 50s ribosomal protein l33 | C1H87_RS05535 | Not Available | Negative | 1349050 - 1349232 | 7025.71 |
| 50s ribosomal protein l28 | C1H87_RS05540 | Not Available | Negative | 1349257 - 1349493 | 8721.86 |
| competence/damage-inducible protein a | C1H87_RS05545 | Not Available | Negative | 1349576 - 1350826 | 45775.0 |
| hpt domain-containing protein | C1H87_RS05550 | Not Available | Negative | 1350826 - 1351167 | 13160.5 |
| fumarylacetoacetate hydrolase family protein | C1H87_RS05555 | Not Available | Negative | 1351168 - 1351779 | 23330.2 |
| 3'-5' exonuclease | C1H87_RS05560 | Not Available | Negative | 1351904 - 1352680 | 29578.4 |
| dihydrolipoamide acetyltransferase family protein | C1H87_RS05565 | Not Available | Negative | 1352788 - 1354113 | 48455.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
