Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | C1H87_RS05475 | Not Available | Positive | 1333540 - 1334076 | 21308.1 |
| yybh family protein | C1H87_RS05480 | Not Available | Positive | 1334105 - 1334548 | 17366.6 |
| glycoside hydrolase family 88 protein | C1H87_RS05485 | Not Available | Negative | 1334561 - 1335736 | 44890.1 |
| alpha-l-fucosidase | C1H87_RS05490 | Not Available | Negative | 1335804 - 1337348 | 58914.0 |
| peptidoglycan dd-metalloendopeptidase family protein | C1H87_RS05495 | Not Available | Negative | 1337457 - 1338152 | 25933.6 |
| t9ss type a sorting domain-containing protein | C1H87_RS23715 | Not Available | Positive | 1338343 - 1338474 | 5021.28 |
| t9ss type a sorting domain-containing protein | C1H87_RS05500 | Not Available | Positive | 1338529 - 1339458 | 35505.3 |
| 30s ribosomal protein s12 methylthiotransferase rimo | C1H87_RS05505 | Not Available | Negative | 1339565 - 1340869 | 49550.5 |
| serine hydrolase domain-containing protein | C1H87_RS05510 | Not Available | Positive | 1341058 - 1342131 | 40081.9 |
| fibronectin type iii domain-containing protein | C1H87_RS23530 | Not Available | Negative | 1342321 - 1346670 | 153720.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
