Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc domain-containing protein | C1H87_RS05025 | Not Available | Positive | 1228825 - 1229253 | 16397.2 |
| lamg-like jellyroll fold domain-containing protein | C1H87_RS05030 | Not Available | Negative | 1229796 - 1232309 | 97490.2 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | C1H87_RS05035 | Not Available | Positive | 1232723 - 1235185 | 92802.9 |
| alpha-xylosidase | C1H87_RS05040 | Not Available | Positive | 1235252 - 1237519 | 86799.6 |
| gfo/idh/moca family protein | C1H87_RS05045 | Not Available | Positive | 1237594 - 1238649 | 39863.8 |
| slc5 family protein | C1H87_RS05050 | Not Available | Positive | 1238673 - 1240250 | 57942.6 |
| beta-glucosidase | C1H87_RS05055 | Not Available | Positive | 1240299 - 1242908 | 97583.3 |
| duf5703 domain-containing protein | C1H87_RS05060 | Not Available | Negative | 1243975 - 1246260 | 88142.1 |
| tonb-dependent receptor | C1H87_RS05065 | Not Available | Negative | 1246507 - 1248660 | 80622.9 |
| hypothetical protein | C1H87_RS05070 | Not Available | Negative | 1248890 - 1249435 | 21154.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
