Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2tm domain-containing protein | C1H87_RS04975 | Not Available | Negative | 1221638 - 1222981 | 52027.3 |
| hypothetical protein | C1H87_RS04980 | Not Available | Negative | 1223006 - 1223626 | 23116.8 |
| energy transducer tonb | C1H87_RS04985 | Not Available | Negative | 1223975 - 1224700 | 27026.6 |
| hypothetical protein | C1H87_RS04990 | Not Available | Positive | 1224987 - 1225412 | 17354.7 |
| crp/fnr family transcriptional regulator | C1H87_RS04995 | Not Available | Positive | 1225480 - 1226043 | 22450.2 |
| tautomerase family protein | C1H87_RS05000 | Not Available | Positive | 1226166 - 1226360 | 7303.8 |
| sdr family nad(p)-dependent oxidoreductase | C1H87_RS05005 | Not Available | Positive | 1226366 - 1227109 | 26380.6 |
| nuclear transport factor 2 family protein | C1H87_RS05010 | Not Available | Positive | 1227121 - 1227489 | 14304.5 |
| voc family protein | C1H87_RS05015 | Not Available | Positive | 1227630 - 1228052 | 16402.3 |
| crp/fnr family transcriptional regulator | C1H87_RS05020 | Not Available | Positive | 1228170 - 1228766 | 23112.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
