Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavivirga |
| Species | Flavivirga eckloniae |
| Strain | ECD14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Ecklonia |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1875697 bp
Thymine Count
1867130 bp
Guanine Count
959621 bp
Cytosine Count
962910 bp
Genome Length
5665358 bp
Protein-coding Genes
4573 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | C1H87_RS04925 | Not Available | Positive | 1213762 - 1214331 | 22686.7 |
| carboxymuconolactone decarboxylase family protein | C1H87_RS04930 | Not Available | Positive | 1214414 - 1214866 | 17581.0 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | C1H87_RS04935 | Not Available | Positive | 1215254 - 1216246 | 34880.9 |
| hypothetical protein | C1H87_RS04940 | Not Available | Positive | 1216837 - 1217337 | 18336.2 |
| hypothetical protein | C1H87_RS04945 | Not Available | Positive | 1217687 - 1218490 | 31117.8 |
| hypothetical protein | C1H87_RS04950 | Not Available | Positive | 1218697 - 1219260 | 21299.7 |
| arginase family protein | C1H87_RS04955 | Not Available | Negative | 1219231 - 1220142 | 34098.1 |
| lytr/algr family response regulator transcription factor | C1H87_RS04960 | Not Available | Negative | 1220195 - 1220950 | 29736.6 |
| 2tm domain-containing protein | C1H87_RS04965 | Not Available | Negative | 1220976 - 1221305 | 12964.7 |
| 2tm domain-containing protein | C1H87_RS04970 | Not Available | Negative | 1221317 - 1221625 | 12627.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
