Sphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19 is characterized as a rod-shaped bacterium. This morphological feature is significant as it often influences the organism's motility and habitat preferences, which are critical for understanding its ecological role. The strain possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in environmental settings. This trait can be advantageous for survival in various habitats, allowing for rapid replication and response to changes in the surrounding conditions. The strain is cataloged under the accession number MIAM00000000.1, which provides a reference point for researchers looking to investigate its genetic, functional, or ecological properties. Accessions are essential for the identification and retrieval of genomic data, supporting further studies into the organism's biology. In summary, the rod shape and single replicon of Sphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19 suggest potential adaptations for life in diverse environments. These traits may enable the bacterium to occupy specific niches within ecosystems, influencing nutrient cycling and interaction with other microorganisms. Understanding these characteristics can contribute to broader insights into microbial ecology and the roles that such bacteria play in their habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingopyxis sp. RIFCSPHIGHO2_12_FULL_65_19

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA3E77_09975Not AvailableNegative3755304 - 375597523303.0
exodeoxyribonuclease vii small subunitA3E77_09980Not AvailablePositive3756058 - 37563189039.46
farnesyl-diphosphate synthaseA3E77_09985Not AvailablePositive3756346 - 375724532141.8
pantetheine-phosphate adenylyltransferaseA3E77_09990Not AvailablePositive3757245 - 375775118458.6
peptidylprolyl isomeraseA3E77_09995Not AvailablePositive3757873 - 375867027819.1
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaA3E77_10000Not AvailablePositive3758707 - 375974437519.0
diguanylate phosphodiesteraseA3E77_10005Not AvailablePositive3759898 - 376208479407.3
hemerythrinA3E77_10010Not AvailablePositive3762145 - 376263319072.2
trna guanosine(34) transglycosylase tgtA3E77_10015Not AvailablePositive3762680 - 376380440681.8
phyllosphere-induced regulator phyrA3E77_10020Not AvailablePositive3764186 - 376498028854.6

Displaying genes 3461 – 3470 of 3567 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.