Sphingobacteriia bacterium RIFOXYD2_FULL_35_12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Family

Genus

Description

Sphingobacteriia bacterium RIFOXYD2_FULL_35_12 is characterized by having a single replicon, which is a feature that may influence its genetic stability and replication dynamics. The bacterium is cataloged under the accession number MIAH00000000.1, indicating its unique identification in genetic databases. The classification of Sphingobacteriia suggests that this bacterium belongs to a group known for its diverse metabolic capabilities, particularly in the degradation of complex organic materials. While specific metabolic pathways are not detailed in the provided information, bacteria within the Sphingobacteriia class are often involved in soil and environmental microbiomes, contributing to nutrient cycling. The presence of a single replicon could imply a streamlined genomic organization, which is common in bacteria that thrive in specific ecological niches. This trait can affect the bacterium's adaptability and efficiency in utilizing available resources. From a biological or ecological perspective, Sphingobacteriia bacterium RIFOXYD2_FULL_35_12 may play a role in biogeochemical processes, particularly in environments where organic matter decomposition is essential. Its metabolic activities could potentially contribute to soil health and nutrient availability, highlighting the importance of this bacterium in ecosystem functioning. Further research would be necessary to elucidate its specific roles and interactions within its ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingobacteriia bacterium RIFOXYD2_FULL_35_12

Gene Summary

Adenine Count

1058198 bp

Thymine Count

1058147 bp

Guanine Count

586659 bp

Cytosine Count

599213 bp

Genome Length

3304765 bp

Protein-coding Genes

2857 genes

Non-Coding Genes

35 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucose-1-phosphate thymidylyltransferaseA2546_09605Not AvailableNegative83269 - 8413232082.7
dtdp-4-dehydrorhamnose 3,5-epimeraseA2546_09610Not AvailableNegative84155 - 8471221010.7
dtdp-glucose 4,6-dehydrataseA2546_09615Not AvailableNegative84715 - 8577040035.1
gdp-fucose synthetaseA2546_09620Not AvailableNegative85828 - 8676334686.8
gdp-mannose 4,6-dehydrataseA2546_09625Not AvailableNegative86756 - 8787142073.5
duf5009 domain-containing proteinA2546_09630Not AvailablePositive87968 - 8911943128.3
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseA2546_09635Not AvailableNegative89160 - 8961816528.9
hypothetical proteinA2546_09640Not AvailableNegative89649 - 9067738319.8
nucleotidyltransferaseA2546_09645Not AvailableNegative90677 - 9139626493.8
hypothetical proteinA2546_09650Not AvailableNegative91405 - 9284455106.9

Displaying genes 71 – 80 of 2892 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.