Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Sphingobacteriia&level=order&phylum=Bacteroidota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Sphingobacteriia&level=family&phylum=Bacteroidota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Sphingobacteriia&level=genus&phylum=Bacteroidota |
| Species | Sphingobacteriia bacterium RIFOXYD2_FULL_35_12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058198 bp
Thymine Count
1058147 bp
Guanine Count
586659 bp
Cytosine Count
599213 bp
Genome Length
3304765 bp
Protein-coding Genes
2857 genes
Non-Coding Genes
35 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homogentisate 1,2-dioxygenase | A2546_01475 | Not Available | Positive | 689238 - 690395 | 44139.2 |
| hypothetical protein | A2546_01480 | Not Available | Positive | 690435 - 690839 | 15657.6 |
| translation initiation factor if-1 | A2546_01485 | Not Available | Positive | 691075 - 691293 | 8262.37 |
| 30s ribosomal protein s13 | A2546_01490 | Not Available | Positive | 691516 - 691896 | 14286.5 |
| 30s ribosomal protein s11 | A2546_01495 | Not Available | Positive | 692049 - 692459 | 14296.4 |
| 30s ribosomal protein s4 | A2546_01500 | Not Available | Positive | 692603 - 693208 | 22929.7 |
| dna-directed rna polymerase subunit alpha | A2546_01505 | Not Available | Positive | 693247 - 694248 | 37582.3 |
| 50s ribosomal protein l17 | A2546_01510 | Not Available | Positive | 694329 - 694841 | 18690.6 |
| carbamoyl phosphate synthase small subunit | A2546_01515 | Not Available | Positive | 694936 - 696039 | 40247.0 |
| type ii 3-dehydroquinate dehydratase | A2546_01520 | Not Available | Positive | 696049 - 696477 | 15476.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
