Sphingobacteriia bacterium RIFOXYD2_FULL_35_12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Family

Genus

Description

Sphingobacteriia bacterium RIFOXYD2_FULL_35_12 is characterized by having a single replicon, which is a feature that may influence its genetic stability and replication dynamics. The bacterium is cataloged under the accession number MIAH00000000.1, indicating its unique identification in genetic databases. The classification of Sphingobacteriia suggests that this bacterium belongs to a group known for its diverse metabolic capabilities, particularly in the degradation of complex organic materials. While specific metabolic pathways are not detailed in the provided information, bacteria within the Sphingobacteriia class are often involved in soil and environmental microbiomes, contributing to nutrient cycling. The presence of a single replicon could imply a streamlined genomic organization, which is common in bacteria that thrive in specific ecological niches. This trait can affect the bacterium's adaptability and efficiency in utilizing available resources. From a biological or ecological perspective, Sphingobacteriia bacterium RIFOXYD2_FULL_35_12 may play a role in biogeochemical processes, particularly in environments where organic matter decomposition is essential. Its metabolic activities could potentially contribute to soil health and nutrient availability, highlighting the importance of this bacterium in ecosystem functioning. Further research would be necessary to elucidate its specific roles and interactions within its ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Sphingobacteriia bacterium RIFOXYD2_FULL_35_12

Gene Summary

Adenine Count

1058198 bp

Thymine Count

1058147 bp

Guanine Count

586659 bp

Cytosine Count

599213 bp

Genome Length

3304765 bp

Protein-coding Genes

2857 genes

Non-Coding Genes

35 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA2546_11065Not AvailablePositive408643 - 411900123208.0
dna-binding response regulatorA2546_11070Not AvailablePositive411917 - 41270229990.4
glucuronyl hydrolaseA2546_11075Not AvailablePositive412850 - 41407346628.9
susc/raga family tonb-linked outer membrane proteinA2546_11080Not AvailablePositive414107 - 417241114279.0
glycan metabolism proteinA2546_11085Not AvailablePositive417260 - 41886758834.0
hypothetical proteinA2546_11090Not AvailablePositive418891 - 42044757444.1
2-deoxy-d-gluconate 3-dehydrogenaseA2546_11095Not AvailablePositive420484 - 42124826994.2
5-dehydro-4-deoxy-d-glucuronate isomeraseA2546_11100Not AvailablePositive421272 - 42210231651.0
hypothetical proteinA2546_11105Not AvailablePositive422153 - 42329843195.4
carbohydrate kinaseA2546_11110Not AvailablePositive423350 - 42433936714.0

Displaying genes 361 – 370 of 2892 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.