Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Sphingobacteriia&level=order&phylum=Bacteroidota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Sphingobacteriia&level=family&phylum=Bacteroidota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Sphingobacteriia&level=genus&phylum=Bacteroidota |
| Species | Sphingobacteriia bacterium RIFOXYD2_FULL_35_12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1058198 bp
Thymine Count
1058147 bp
Guanine Count
586659 bp
Cytosine Count
599213 bp
Genome Length
3304765 bp
Protein-coding Genes
2857 genes
Non-Coding Genes
35 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | A2546_00620 | Not Available | Positive | 2213147 - 2213935 | 29466.7 |
| rna pseudouridine synthase | A2546_00625 | Not Available | Positive | 2213932 - 2214642 | 27033.0 |
| amidohydrolase | A2546_00630 | Not Available | Negative | 2214646 - 2215917 | 45121.6 |
| peroxidase | A2546_00635 | Not Available | Negative | 2216001 - 2216636 | 23353.9 |
| dna polymerase iv | A2546_00640 | Not Available | Negative | 2216695 - 2217876 | 43968.2 |
| hypothetical protein | A2546_00645 | Not Available | Positive | 2217955 - 2219385 | 53361.4 |
| 16s rrna processing protein rimm | A2546_00650 | Not Available | Negative | 2219390 - 2219914 | 19391.4 |
| 30s ribosomal protein s16 | A2546_00655 | Not Available | Negative | 2219997 - 2220470 | 17867.6 |
| signal recognition particle protein | A2546_00660 | Not Available | Negative | 2220565 - 2221887 | 48384.1 |
| hypothetical protein | A2546_00665 | Not Available | Positive | 2221977 - 2222723 | 28215.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
