Pseudomonadales bacterium RIFCSPHIGHO2_01_FULL_64_12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Genus

Description

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonadales bacterium RIFCSPHIGHO2_01_FULL_64_12


Gene Summary

Adenine Count

747772 bp

Thymine Count

738750 bp

Guanine Count

1325887 bp

Cytosine Count

1334708 bp

Genome Length

4165094 bp

Protein-coding Genes

3429 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
diguanylate cyclaseA2883_14140Not Available+41 - 139048488.9
tonb-dependent receptorA2883_14145Not Available+1580 - 372778512.6
Ncrna_class:srp_rnaNot AvailableNot Available+3079 - 3175Not Available
4-hydroxybenzoate 3-monooxygenaseA2883_14150Not Available-3769 - 495343991.9
arac family transcriptional regulatorA2883_14155Not Available+5116 - 599433186.8
tetr family transcriptional regulatorA2883_14160Not Available-5998 - 654319682.2
addiction module antidote protein, higa familyA2883_14170Not Available+8586 - 886710198.4
hypothetical proteinA2883_14175Not Available-10943 - 1122110325.3
hypothetical proteinA2883_14180Not Available+11359 - 1164010296.3
hypothetical proteinA2883_14185Not Available+11633 - 118878897.45

Displaying genes 1 – 10 of 3473 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm00030584-CDP-2-C-methyl-D-erythritol 2-phosphateC14H22N3O17P3Chemical structure of 4-CDP-2-C-methyl-D-erythritol 2-phosphateNot available
Average597.257Da
Monoisotopic597.0184016Da
BASm00034972-C-methyl-D-erythritol 2,4-cyclic diphosphateC5H10O9P2Chemical structure of 2-C-methyl-D-erythritol 2,4-cyclic diphosphate143488-44-2
Average276.075Da
Monoisotopic275.9800049Da
BASm00050533',3'-c-di-AMPC20H22N10O12P2Chemical structure of 3',3'-c-di-AMPNot available
Average656.403Da
Monoisotopic656.0904873Da

Displaying 1–5 of 5 metabolites