Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK607 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1184390 bp
Thymine Count
1179281 bp
Guanine Count
1513161 bp
Cytosine Count
1497706 bp
Genome Length
5374538 bp
Protein-coding Genes
4983 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase (quinone-dependent) catalytic subunit | SAMN04515620_103121 | Not Available | Negative | 831088 - 831678 | 21426.7 |
| 3-deoxy-d-manno-oct-2-ulosonic acid (kdo) hydroxylase | SAMN04515620_103122 | Not Available | Positive | 831888 - 832769 | 33057.3 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN04515620_103123 | Not Available | Positive | 832766 - 834103 | 48574.2 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN04515620_103124 | Not Available | Positive | 834115 - 834885 | 27821.1 |
| lipopolysaccharide biosynthesis protein, lps:glycosyltransferase | SAMN04515620_103125 | Not Available | Positive | 835132 - 836136 | 38187.2 |
| o-antigen ligase | SAMN04515620_103126 | Not Available | Positive | 836246 - 837529 | 47765.5 |
| udp-galactose 4-epimerase | SAMN04515620_103127 | Not Available | Negative | 837604 - 838638 | 37730.9 |
| outer membrane protein, multidrug efflux system | SAMN04515620_103128 | Not Available | Negative | 838781 - 840223 | 51982.5 |
| multidrug efflux pump | SAMN04515620_103129 | Not Available | Negative | 840216 - 843368 | 112038.0 |
| membrane fusion protein, multidrug efflux system | SAMN04515620_103130 | Not Available | Negative | 843380 - 844606 | 42277.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
