Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK607 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1184390 bp
Thymine Count
1179281 bp
Guanine Count
1513161 bp
Cytosine Count
1497706 bp
Genome Length
5374538 bp
Protein-coding Genes
4983 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04515620_103110 | Not Available | Positive | 817564 - 819498 | 70899.2 |
| dna-binding protein h-ns | SAMN04515620_103111 | Not Available | Positive | 819544 - 819864 | 11757.0 |
| phosphomannomutase / phosphoglucomutase | SAMN04515620_103112 | Not Available | Positive | 820073 - 821461 | 50093.1 |
| heptosyltransferase-1 | SAMN04515620_103113 | Not Available | Positive | 821486 - 822517 | 37887.6 |
| selenocysteine-specific translation elongation factor selb | SAMN04515620_103114 | Not Available | Negative | 822636 - 824576 | 70617.9 |
| l-seryl-trna(sec) selenium transferase | SAMN04515620_103115 | Not Available | Negative | 824573 - 826030 | 51933.9 |
| fdhe protein | SAMN04515620_103116 | Not Available | Negative | 826031 - 826966 | 34306.1 |
| formate dehydrogenase subunit gamma | SAMN04515620_103117 | Not Available | Negative | 826977 - 827618 | 24452.6 |
| formate dehydrogenase (quinone-dependent) iron-sulfur subunit | SAMN04515620_103118 | Not Available | Negative | 827615 - 828601 | 35376.2 |
| formate dehydrogenase (quinone-dependent) catalytic subunit | SAMN04515620_103119 | Not Available | Negative | 828610 - 831039 | 90111.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
