Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK607 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1184390 bp
Thymine Count
1179281 bp
Guanine Count
1513161 bp
Cytosine Count
1497706 bp
Genome Length
5374538 bp
Protein-coding Genes
4983 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein phosphatase | SAMN04515620_102299 | Not Available | Positive | 673196 - 674110 | 33540.1 |
| ribonuclease ph | SAMN04515620_102300 | Not Available | Positive | 674120 - 674854 | 26343.6 |
| tatd dnase family protein | SAMN04515620_102301 | Not Available | Positive | 674986 - 675729 | 27057.4 |
| hypothetical protein | SAMN04515620_102302 | Not Available | Positive | 675722 - 676438 | 25549.9 |
| l-lactate dehydrogenase (cytochrome) | SAMN04515620_102303 | Not Available | Negative | 676450 - 677580 | 40352.1 |
| squalene-associated fad-dependent desaturase | SAMN04515620_102304 | Not Available | Negative | 677695 - 679053 | 49111.7 |
| farnesyl-diphosphate farnesyltransferase | SAMN04515620_102305 | Not Available | Negative | 679093 - 679926 | 31641.1 |
| squalene synthase hpnc | SAMN04515620_102306 | Not Available | Negative | 680043 - 680855 | 31068.5 |
| rnd family efflux transporter, mfp subunit | SAMN04515620_102307 | Not Available | Positive | 681075 - 682277 | 42273.6 |
| multidrug efflux pump subunit acrb | SAMN04515620_102308 | Not Available | Positive | 682274 - 685369 | 113045.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
