Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK607 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1184390 bp
Thymine Count
1179281 bp
Guanine Count
1513161 bp
Cytosine Count
1497706 bp
Genome Length
5374538 bp
Protein-coding Genes
4983 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04515620_102209 | Not Available | Positive | 575998 - 576747 | 25796.9 |
| outer membrane lipoprotein slyb | SAMN04515620_102210 | Not Available | Positive | 576967 - 577422 | 15137.0 |
| transcriptional regulator, xre family with cupin sensor | SAMN04515620_102211 | Not Available | Negative | 577522 - 578139 | 21951.3 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN04515620_102212 | Not Available | Positive | 578205 - 579440 | 44425.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN04515620_102213 | Not Available | Positive | 579477 - 580439 | 35492.2 |
| molecular chaperone htpg | SAMN04515620_102214 | Not Available | Negative | 580570 - 582483 | 71785.9 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04515620_102215 | Not Available | Negative | 582673 - 584175 | 55221.7 |
| protein of unknown function | SAMN04515620_102216 | Not Available | Positive | 584313 - 584633 | 11540.7 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04515620_102217 | Not Available | Positive | 584633 - 585226 | 21341.0 |
| eama-like transporter family protein | SAMN04515620_102218 | Not Available | Positive | 585261 - 586139 | 30610.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
