Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK607 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1184390 bp
Thymine Count
1179281 bp
Guanine Count
1513161 bp
Cytosine Count
1497706 bp
Genome Length
5374538 bp
Protein-coding Genes
4983 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | SAMN04515620_102199 | Not Available | Negative | 565119 - 565970 | 31418.8 |
| g/u mismatch-specific uracil-dna glycosylase | SAMN04515620_102200 | Not Available | Negative | 566099 - 566593 | 18165.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04515620_102201 | Not Available | Negative | 566612 - 567295 | 25278.7 |
| long-chain acyl-coa synthetase | SAMN04515620_102202 | Not Available | Positive | 567507 - 569474 | 73168.1 |
| branched-chain amino acid transport system atp-binding protein | SAMN04515620_102203 | Not Available | Positive | 569479 - 570363 | 32505.4 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN04515620_102204 | Not Available | Positive | 570377 - 571291 | 32504.2 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN04515620_102205 | Not Available | Positive | 571339 - 572415 | 39042.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family (tc 3.a.1.4.-) | SAMN04515620_102206 | Not Available | Positive | 572476 - 573798 | 47597.3 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN04515620_102207 | Not Available | Positive | 573861 - 574664 | 29811.2 |
| phenylacetate-coa ligase | SAMN04515620_102208 | Not Available | Positive | 574726 - 575985 | 45375.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
