Collimonas sp. OK607

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas sp. OK607 is a unique microbial organism characterized by having a single replicon. This trait suggests a streamlined genetic organization, which may influence its adaptability and replication efficiency in various environments. The strain is cataloged under the accession number FOKF00000000.1, providing a reference for researchers interested in studying its genetic makeup and functional capabilities. Collimonas species are known for their ecological role in soil environments, particularly in the degradation of organic matter. This trait aligns with the broader ecological function of Collimonas, as they are often involved in nutrient cycling and contribute to soil health. Their ability to thrive in diverse conditions may make them important players in maintaining the balance of microbial communities in soil ecosystems. The single replicon feature of Collimonas sp. OK607 could provide insights into its evolutionary adaptations and metabolic pathways. Understanding these traits could further elucidate how this organism interacts with its environment, particularly in nutrient-poor conditions where it may utilize unique strategies for survival and growth. Researchers studying Collimonas sp. OK607 may gain valuable information about its role in soil microbiomes and its potential applications in bioremediation or sustainable agriculture practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas sp. OK607
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas sp. OK607 genome assembly, contig: Ga0070535_190, whole

Gene Summary

Adenine Count

1184390 bp

Thymine Count

1179281 bp

Guanine Count

1513161 bp

Cytosine Count

1497706 bp

Genome Length

5374538 bp

Protein-coding Genes

4983 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitt/taut family transport system substrate-binding proteinSAMN04515620_10229Not AvailablePositive388016 - 38904737520.3
hypothetical proteinSAMN04515620_10230Not AvailablePositive389119 - 38991329433.4
dna-binding transcriptional regulator, fadr familySAMN04515620_10231Not AvailableNegative389968 - 39067526634.0
uncharacterized conserved protein ygbk, duf1537 familySAMN04515620_10232Not AvailableNegative390739 - 39213649319.3
ribulose-bisphosphate carboxylase large chainSAMN04515620_10233Not AvailableNegative392133 - 39337444891.1
nadp oxidoreductase coenzyme f420-dependentSAMN04515620_10234Not AvailableNegative393451 - 39428130295.8
nitrate/nitrite transporter narkSAMN04515620_10235Not AvailableNegative394338 - 39568447928.4
40-residue yvtn family beta-propeller repeat-containing proteinSAMN04515620_10236Not AvailablePositive396389 - 39738734865.5
cytochrome b561SAMN04515620_10237Not AvailablePositive397366 - 39793220930.4
thiamine biosynthesis lipoproteinSAMN04515620_10238Not AvailableNegative397952 - 39898637480.8

Displaying genes 471 – 480 of 5111 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.