Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24

Kingdom

Phylum

Class

Deltaproteobacteria

Order

Family

Genus

Description

Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24 is characterized by having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation to its environment. The accession number for this bacterium is MGTD00000000.1, which provides a reference point for its genetic information within microbial databases. As a member of the Deltaproteobacteria class, this bacterium is likely involved in important ecological processes, particularly in environments where sulfate reduction is prevalent. Members of this class are commonly associated with anaerobic conditions and play crucial roles in biogeochemical cycles, particularly in the degradation of organic matter and in the cycling of sulfur compounds. The presence of only one replicon may suggest a specific evolutionary adaptation that allows RIFOXYD12_FULL_56_24 to thrive in its ecological niche, potentially offering advantages in nutrient acquisition or environmental resilience. This trait could also reflect a lifestyle that is closely tied to its surrounding microbial community, emphasizing the interconnectedness of organisms within ecosystems. Understanding the genomic characteristics of Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24 can provide insights into its ecological roles, particularly in anaerobic environments where it may contribute to sulfur cycling and organic matter decomposition. Overall, this bacterium exemplifies the diverse adaptations present within the Deltaproteobacteria class, highlighting its potential significance in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Deltaproteobacteria bacterium RIFOXYD12_FULL_56_24

Gene Summary

Adenine Count

663374 bp

Thymine Count

659743 bp

Guanine Count

851897 bp

Cytosine Count

861064 bp

Genome Length

3036381 bp

Protein-coding Genes

2628 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospho-n-acetylmuramoyl-pentapeptide- transferaseA2512_01815Not AvailableNegative2061451 - 206253039163.9
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseA2512_01820Not AvailableNegative2062542 - 206390948482.2
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseA2512_01825Not AvailableNegative2064173 - 206571455050.4
hypothetical proteinA2512_01830Not AvailableNegative2065813 - 206781672549.7
hypothetical proteinA2512_01835Not AvailableNegative2067824 - 206816812256.8
16s rrna (cytosine(1402)-n(4))-methyltransferaseA2512_01840Not AvailableNegative2068171 - 206905832374.2
division/cell wall cluster transcriptional repressor mrazA2512_01845Not AvailableNegative2069065 - 206954118409.3
aaa family atpaseA2512_01850Not AvailablePositive2070172 - 207141645567.2
addiction module antidote protein, higa familyA2512_01855Not AvailablePositive2071580 - 207187911286.8
dna protecting protein dpraA2512_12590Not AvailablePositive2073049 - 207416439641.0

Displaying genes 1801 – 1810 of 2672 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.