Candidatus Bathyarchaeota archaeon RBG_16_48_13

Kingdom

Thermoproteati

Phylum

Candidatus Bathyarchaeota

Class

Order

Family

Genus

Description

Candidatus Bathyarchaeota archaeon RBG_16_48_13 is characterized by a single replicon, indicating a streamlined genomic structure that may be advantageous for its ecological niche. The accession number for this archaeon is MEZH00000000.1, which serves as a reference for genomic data in scientific databases. The phylogenetic placement of Candidatus Bathyarchaeota suggests its role in biogeochemical cycling, particularly in environments such as marine sediments, where members of this phylum are often found. The Bathyarchaeota have been associated with the degradation of organic matter and the cycling of carbon, which is crucial in aquatic ecosystems. The simplicity of having a single replicon may reflect an adaptation to specific environmental conditions, possibly facilitating efficient replication and resource utilization under limiting factors. This trait could enhance the archaeon's survival and metabolic capabilities in complex and variable habitats. Ecologically, Candidatus Bathyarchaeota archaeon RBG_16_48_13 likely plays a significant role in the cycling of nutrients within its ecosystem, contributing to the overall health and function of the marine environment. The interactions it engages in with other microbial communities underscore its potential importance in maintaining ecological balance and promoting organic matter turnover in sediments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Bathyarchaeota archaeon RBG_16_48_13

Gene Summary

Adenine Count

219531 bp

Thymine Count

219183 bp

Guanine Count

204252 bp

Cytosine Count

203015 bp

Genome Length

848615 bp

Protein-coding Genes

867 genes

Non-Coding Genes

23 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA3K70_01120Not AvailableNegative17291 - 1838239299.2
hypothetical proteinA3K70_01125Not AvailablePositive18539 - 1985247421.6
hypothetical proteinA3K70_01130Not AvailableNegative19961 - 2124447160.2
hypothetical proteinA3K70_01135Not AvailableNegative21269 - 2176019035.8
hypothetical proteinA3K70_01140Not AvailablePositive22057 - 2331347507.9
udp-glucose 4-epimeraseA3K70_01145Not AvailableNegative23392 - 2427932738.5
hypothetical proteinA3K70_01150Not AvailableNegative24573 - 2505817570.6
dna-binding proteinA3K70_01155Not AvailableNegative25184 - 2547410406.6
hypothetical proteinA3K70_01160Not AvailablePositive25624 - 2671840523.4
phosphoglucosamine mutaseA3K70_01165Not AvailablePositive26777 - 2816250099.5

Displaying genes 21 – 30 of 890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

28 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001767oxalateC2O4Chemical structure of oxalateNot available
Average88.019Da
Monoisotopic87.979658488Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm0002546(indol-3-yl)acetyl-CoAC31H39N8O17P3SChemical structure of (indol-3-yl)acetyl-CoANot available
Average920.68Da
Monoisotopic920.1388683Da

Displaying 1–10 of 28 metabolites

Health Effects

No health effects information available for this bacterium.