Candidatus Sediminicultor quintus

Kingdom

Pseudomonadati

Phylum

Atribacterota

Class

Candidatus Phoenicimicrobiia

Order

Candidatus Pheonicimicrobiales

Family

Candidatus Phoenicimicrobiaceae

Genus

Candidatus Sediminicultor

Description

Candidatus Sediminicultor quintus is a recently identified microbial species characterized by a single replicon. The species has been cataloged under the accession number MEYH00000000.1, which provides a reference for genomic studies and comparative analyses within the microbial community. This organism is part of the broader microbial diversity and contributes to our understanding of sediment-associated microorganisms. Its specific ecological role, mechanisms of adaptation, and interactions within its environment are key areas for further research. The presence of a single replicon suggests a streamlined genetic organization, which can be advantageous for survival in specific ecological niches. From an ecological perspective, Candidatus Sediminicultor quintus may play an important role in sedimentary environments, potentially influencing nutrient cycling and organic matter degradation. Understanding the characteristics and behaviors of such microorganisms is crucial for comprehending the dynamics of microbial ecosystems and their responses to environmental changes. Further studies on this species could unveil important insights into microbial ecology and the functions of microorganisms in sedimentary habitats.

Taxonomy

KingdomPseudomonadati
PhylumAtribacterota
ClassCandidatus Phoenicimicrobiia
OrderCandidatus Pheonicimicrobiales
FamilyCandidatus Phoenicimicrobiaceae
GenusCandidatus Sediminicultor
SpeciesCandidatus Sediminicultor quintus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Sediminicultor quintus

Gene Summary

Adenine Count

633232 bp

Thymine Count

624805 bp

Guanine Count

353199 bp

Cytosine Count

335105 bp

Genome Length

1954112 bp

Protein-coding Genes

1654 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s12A2V47_04850Not AvailableNegative1459942 - 146032514299.7
dna-directed rna polymerase subunit beta'A2V47_04855Not AvailableNegative1460651 - 1465732191158.0
dna-directed rna polymerase subunit betaA2V47_04860Not AvailableNegative1465921 - 1469526134745.0
50s ribosomal protein l7/l12A2V47_04865Not AvailableNegative1469989 - 147037213631.6
50s ribosomal protein l10A2V47_04870Not AvailableNegative1470558 - 147109720015.8
50s ribosomal protein l1A2V47_04875Not AvailableNegative1471318 - 147203726346.1
50s ribosomal protein l11A2V47_04880Not AvailableNegative1472091 - 147252215546.2
transcription termination/antitermination protein nusgA2V47_04885Not AvailableNegative1472582 - 147311520133.7
preprotein translocase subunit seceA2V47_04890Not AvailableNegative1473174 - 14733747607.8
Trna-trpNot AvailableNot AvailablePositive1473418 - 1473493Not Available

Displaying genes 1271 – 1280 of 1701 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

18 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002319Cu(+)CuChemical structure of Cu(+)7440-50-8
Average63.546Da
Monoisotopic62.92960108Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0003212N(6)-acetyl-N(6)-hydroxy-L-lysineC8H16N2O4Chemical structure of N(6)-acetyl-N(6)-hydroxy-L-lysineNot available
Average204.226Da
Monoisotopic204.111007003Da
BASm0004099L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioateC15H25N4O8Chemical structure of L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioateNot available
Average389.386Da
Monoisotopic389.167787361Da
BASm0004512N(2)-citryl-N(6)-acetyl-N(6)-hydroxy-L-lysineC14H19N2O10Chemical structure of N(2)-citryl-N(6)-acetyl-N(6)-hydroxy-L-lysineNot available
Average375.312Da
Monoisotopic375.1056156Da
BASm0004531(6S)-NADHXC21H29N7O15P2Chemical structure of (6S)-NADHXNot available
Average681.446Da
Monoisotopic681.1207844Da
BASm0004532(6R)-NADHXC21H29N7O15P2Chemical structure of (6R)-NADHXNot available
Average681.446Da
Monoisotopic681.1207844Da
BASm0004533(6S)-NADPHXC21H28N7O18P3Chemical structure of (6S)-NADPHXNot available
Average759.409Da
Monoisotopic759.0725624Da

Displaying 1–10 of 18 metabolites

Health Effects

No health effects information available for this bacterium.