Rodentibacter caecimuris

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter caecimuris is a Gram-negative bacterial species characterized by its rod shape. This organism has a single replicon, which is indicative of its genetic structure. The genome of Rodentibacter caecimuris is accessible through the accession number MLAA00000000.1, allowing for further exploration of its genetic makeup and potential functions. As a member of the microbial community, Rodentibacter caecimuris may play a role in the gut microbiota of rodents. The presence of such bacteria is crucial for various biological processes, including digestion and the maintenance of gut health. The specific ecological role of Rodentibacter caecimuris remains to be fully elucidated, but its classification as a rod-shaped, Gram-negative bacterium positions it within a diverse group of microorganisms that interact with their hosts and the environment in complex ways. Understanding the traits of Rodentibacter caecimuris contributes to our broader knowledge of microbial diversity and the intricate relationships between bacteria and their hosts. Its status as a Gram-negative rod may suggest certain metabolic pathways or interactions with other gut microbiota, which could have implications for the health of rodent populations and the ecosystems they inhabit. Continued research into Rodentibacter caecimuris may reveal important insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter caecimuris
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter caecimuris strain 1998236014 contig_75, whole genome

Gene Summary

Adenine Count

725860 bp

Thymine Count

730415 bp

Guanine Count

439033 bp

Cytosine Count

431353 bp

Genome Length

2326661 bp

Protein-coding Genes

1956 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l15BKG89_00620Not AvailablePositive139015 - 13944915050.3
preprotein translocase subunit secyBKG89_00625Not AvailablePositive139457 - 14078248476.2
50s ribosomal protein l36BKG89_00630Not AvailablePositive140815 - 1409284279.48
30s ribosomal protein s13BKG89_00635Not AvailablePositive141068 - 14142413265.4
30s ribosomal protein s11BKG89_00640Not AvailablePositive141439 - 14183114035.1
30s ribosomal protein s4BKG89_00645Not AvailablePositive141862 - 14248223538.6
dna-directed rna polymerase subunit alphaBKG89_00650Not AvailablePositive142514 - 14350336522.9
50s ribosomal protein l17BKG89_00655Not AvailablePositive143545 - 14392814332.4
hypothetical proteinBKG89_00660Not AvailableNegative143994 - 14468026303.5
trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator nadrBKG89_00665Not AvailableNegative144677 - 14595149691.7

Displaying genes 191 – 200 of 2055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.