Rodentibacter caecimuris

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter caecimuris is a Gram-negative bacterial species characterized by its rod shape. This organism has a single replicon, which is indicative of its genetic structure. The genome of Rodentibacter caecimuris is accessible through the accession number MLAA00000000.1, allowing for further exploration of its genetic makeup and potential functions. As a member of the microbial community, Rodentibacter caecimuris may play a role in the gut microbiota of rodents. The presence of such bacteria is crucial for various biological processes, including digestion and the maintenance of gut health. The specific ecological role of Rodentibacter caecimuris remains to be fully elucidated, but its classification as a rod-shaped, Gram-negative bacterium positions it within a diverse group of microorganisms that interact with their hosts and the environment in complex ways. Understanding the traits of Rodentibacter caecimuris contributes to our broader knowledge of microbial diversity and the intricate relationships between bacteria and their hosts. Its status as a Gram-negative rod may suggest certain metabolic pathways or interactions with other gut microbiota, which could have implications for the health of rodent populations and the ecosystems they inhabit. Continued research into Rodentibacter caecimuris may reveal important insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter caecimuris
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter caecimuris strain 1998236014 contig_75, whole genome

Gene Summary

Adenine Count

725860 bp

Thymine Count

730415 bp

Guanine Count

439033 bp

Cytosine Count

431353 bp

Genome Length

2326661 bp

Protein-coding Genes

1956 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
capsular biosynthesis proteinBKG89_09370Not AvailablePositive2018810 - 202002145044.4
glycosyl transferaseBKG89_09375Not AvailablePositive2020023 - 202061022654.1
nucleoside-diphosphate sugar epimeraseBKG89_09380Not AvailablePositive2020644 - 202253670608.4
ligaseBKG89_09385Not AvailablePositive2022542 - 202377746600.5
dtdp-glucose 4,6-dehydrataseBKG89_09390Not AvailablePositive2023864 - 202492539937.3
glucose-1-phosphate thymidylyltransferaseBKG89_09395Not AvailablePositive2025000 - 202587232312.9
dtdp-4-dehydrorhamnose reductaseBKG89_09400Not AvailablePositive2025873 - 202675131984.1
dtdp-4-dehydrorhamnose 3,5-epimeraseBKG89_09405Not AvailablePositive2027076 - 202761820721.5
hypothetical proteinBKG89_09410Not AvailableNegative2027694 - 202828123169.0
aminodeoxychorismate synthase component iBKG89_09415Not AvailableNegative2028265 - 202925437961.7

Displaying genes 1831 – 1840 of 2055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.