Rodentibacter caecimuris

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter caecimuris is a Gram-negative bacterial species characterized by its rod shape. This organism has a single replicon, which is indicative of its genetic structure. The genome of Rodentibacter caecimuris is accessible through the accession number MLAA00000000.1, allowing for further exploration of its genetic makeup and potential functions. As a member of the microbial community, Rodentibacter caecimuris may play a role in the gut microbiota of rodents. The presence of such bacteria is crucial for various biological processes, including digestion and the maintenance of gut health. The specific ecological role of Rodentibacter caecimuris remains to be fully elucidated, but its classification as a rod-shaped, Gram-negative bacterium positions it within a diverse group of microorganisms that interact with their hosts and the environment in complex ways. Understanding the traits of Rodentibacter caecimuris contributes to our broader knowledge of microbial diversity and the intricate relationships between bacteria and their hosts. Its status as a Gram-negative rod may suggest certain metabolic pathways or interactions with other gut microbiota, which could have implications for the health of rodent populations and the ecosystems they inhabit. Continued research into Rodentibacter caecimuris may reveal important insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter caecimuris
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter caecimuris strain 1998236014 contig_75, whole genome

Gene Summary

Adenine Count

725860 bp

Thymine Count

730415 bp

Guanine Count

439033 bp

Cytosine Count

431353 bp

Genome Length

2326661 bp

Protein-coding Genes

1956 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (uracil(1498)-n(3))-methyltransferaseBKG89_09220Not AvailablePositive1994824 - 199555827792.9
hypothetical proteinBKG89_09225Not AvailablePositive1995555 - 199611521000.9
holliday junction dna helicase ruvaBKG89_09230Not AvailablePositive1996115 - 199653415461.6
fumarate reductase subunit dBKG89_09235Not AvailableNegative1996783 - 199712712683.1
fumarate reductase subunit cBKG89_09240Not AvailableNegative1997139 - 199754315601.9
succinate dehydrogenase/fumarate reductase iron-sulfur subunitBKG89_09245Not AvailableNegative1997553 - 199832328665.5
fumarate reductase (quinol) flavoprotein subunitBKG89_09250Not AvailableNegative1998316 - 200011566026.3
elongation factor p lysine(34) lysyltransferaseBKG89_09255Not AvailablePositive2000350 - 200133637681.9
serine transporterBKG89_09260Not AvailablePositive2001634 - 200287245724.1
l-serine ammonia-lyaseBKG89_09265Not AvailablePositive2002908 - 200427549345.8

Displaying genes 1801 – 1810 of 2055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.