Rodentibacter caecimuris

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter caecimuris is a Gram-negative bacterial species characterized by its rod shape. This organism has a single replicon, which is indicative of its genetic structure. The genome of Rodentibacter caecimuris is accessible through the accession number MLAA00000000.1, allowing for further exploration of its genetic makeup and potential functions. As a member of the microbial community, Rodentibacter caecimuris may play a role in the gut microbiota of rodents. The presence of such bacteria is crucial for various biological processes, including digestion and the maintenance of gut health. The specific ecological role of Rodentibacter caecimuris remains to be fully elucidated, but its classification as a rod-shaped, Gram-negative bacterium positions it within a diverse group of microorganisms that interact with their hosts and the environment in complex ways. Understanding the traits of Rodentibacter caecimuris contributes to our broader knowledge of microbial diversity and the intricate relationships between bacteria and their hosts. Its status as a Gram-negative rod may suggest certain metabolic pathways or interactions with other gut microbiota, which could have implications for the health of rodent populations and the ecosystems they inhabit. Continued research into Rodentibacter caecimuris may reveal important insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter caecimuris
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter caecimuris strain 1998236014 contig_75, whole genome

Gene Summary

Adenine Count

725860 bp

Thymine Count

730415 bp

Guanine Count

439033 bp

Cytosine Count

431353 bp

Genome Length

2326661 bp

Protein-coding Genes

1956 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i-f crispr-associated protein csy3BKG89_06700Not AvailablePositive1464617 - 146561837726.9
type i-f crispr-associated endoribonuclease cas6/csy4BKG89_06705Not AvailablePositive1465621 - 146618421443.0
type i-f crispr-associated helicase cas3BKG89_06710Not AvailableNegative1466228 - 1469566128251.0
subtype i-f crispr-associated endonuclease cas1BKG89_06715Not AvailableNegative1469563 - 147052836123.4
acetolactate synthase small subunitBKG89_06720Not AvailableNegative1470656 - 147114718347.3
acetolactate synthase, large subunit, biosynthetic typeBKG89_06725Not AvailableNegative1471147 - 147286562413.5
na+/h+ antiporterBKG89_06730Not AvailableNegative1473097 - 147461754159.2
dna-binding protein h-ns-like proteinBKG89_06735Not AvailablePositive1475134 - 147554415504.6
formyltetrahydrofolate deformylaseBKG89_06740Not AvailablePositive1475607 - 147644332083.0
3-phosphoshikimate 1-carboxyvinyltransferaseBKG89_06745Not AvailablePositive1476594 - 147789247470.6

Displaying genes 1371 – 1380 of 2055 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.