Paenibacillus sp. DMB5

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus sp. DMB5 is characterized by having a single replicon, indicating a streamlined genomic architecture typical of certain bacterial species. This feature can influence the organism's adaptability and stability in various environments. The accession number for this strain is LRAC00000000.1, which provides a reference for researchers seeking to access its genomic information. Paenibacillus species are known for their diverse metabolic capabilities and ecological roles, often found in soil and rhizosphere environments. These bacteria can contribute to nutrient cycling and may interact symbiotically with plants, potentially enhancing plant growth and health. The presence of a single replicon in Paenibacillus sp. DMB5 might be indicative of its evolutionary adaptations to specific niches, allowing for efficient replication and resource utilization in its habitat. The ecological insight drawn from studying Paenibacillus sp. DMB5 pertains to its potential utility in agriculture or bioremediation. Given the general attributes of Paenibacillus species, this strain may play a role in promoting soil health or assisting in the breakdown of organic materials. Further research into its specific interactions and functionalities could reveal valuable applications in sustainable practices.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus sp. DMB5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paenibacillus sp. DMB5 spades_9_len:142289, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5989 genes

Non-Coding Genes

200 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide permeaseAWJ19_00150Not AvailablePositive98125 - 9907534816.0
peptide abc transporter permeaseAWJ19_00155Not AvailablePositive99080 - 9992530465.1
peptide abc transporter atp-binding proteinAWJ19_00160Not AvailablePositive99941 - 10095136796.5
peptide abc transporter substrate-binding proteinAWJ19_00165Not AvailablePositive100948 - 10186534055.7
hypothetical proteinAWJ19_00170Not AvailablePositive101881 - 10232116518.4
short-chain dehydrogenaseAWJ19_00175Not AvailableNegative102462 - 10330130461.5
hypothetical proteinAWJ19_00180Not AvailablePositive103495 - 10453239853.7
hypothetical proteinAWJ19_00185Not AvailableNegative104660 - 10505213882.5
xre family transcriptional regulatorAWJ19_00190Not AvailablePositive105312 - 10600726520.2
histidine kinaseAWJ19_00195Not AvailablePositive106004 - 10747054113.4

Displaying genes 81 – 90 of 2235 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.