Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Donghicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Donghicola |
| Species | Donghicola eburneus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
858090 bp
Thymine Count
864101 bp
Guanine Count
1248189 bp
Cytosine Count
1242462 bp
Genome Length
4212842 bp
Protein-coding Genes
3880 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| traf conjugal transfer protein | KARMA_0017 | Not Available | Negative | 19526 - 20338 | 29093.3 |
| lytic transglycosylase | KARMA_0018 | Not Available | Negative | 20335 - 21489 | 41216.8 |
| putative secreted protein | KARMA_0019 | Not Available | Negative | 21479 - 21646 | 5803.03 |
| virb4 type iv secretion system protein | KARMA_0020 | Not Available | Negative | 21643 - 24018 | 88543.6 |
| virb3 type iv secretion system protein | KARMA_0021 | Not Available | Negative | 24008 - 24286 | 10434.1 |
| virb2 type iv secretion system protein | KARMA_0022 | Not Available | Negative | 24279 - 24572 | 10048.6 |
| lytic transglycosylase | KARMA_0023 | Not Available | Negative | 24569 - 25189 | 22155.1 |
| hypothetical protein | KARMA_0024 | Not Available | Negative | 25233 - 25586 | 13034.5 |
| putative secreted protein | KARMA_0025 | Not Available | Positive | 25729 - 26049 | 12235.7 |
| xre family transcriptional regulator | KARMA_0026 | Not Available | Positive | 26174 - 26431 | 9467.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
