Alteromonas mediterranea DE

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Alteromonas

Description

Alteromonas mediterranea DE is a Gram-negative, rod-shaped bacterium that thrives in aquatic environments. As a heterotrophic organism, it obtains its energy through the consumption of organic compounds, which is characteristic of many marine bacteria. This organism is strictly aerobic, indicating that it requires oxygen for its metabolic processes. The ecological role of Alteromonas mediterranea DE may be significant in nutrient cycling within its aquatic habitat, as its heterotrophic nature enables it to contribute to the degradation of organic matter, thereby influencing the availability of nutrients for other microorganisms and higher trophic levels. Its presence in marine ecosystems may also reflect its adaptation to specific environmental conditions, such as varying levels of organic material and oxygen availability, which could impact community dynamics in these habitats. Understanding the metabolic capabilities and ecological contributions of Alteromonas mediterranea DE could provide valuable insights into microbial processes in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusAlteromonas
SpeciesAlteromonas mediterranea
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Alteromonas mediterranea DE
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Alteromonas mediterranea DE

Accession NumberNC_011138.3

Gene Summary

Adenine Count

1237137 bp

Thymine Count

1232999 bp

Guanine Count

1007649 bp

Cytosine Count

1002890 bp

Genome Length

4480937 bp

Protein-coding Genes

3903 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna polymerase iii subunit betaMADE_RS00010P22838+1659 - 275940911.7
dna replication/repair protein recfMADE_RS00015Q15ZZ5+2871 - 395940994.7
dna topoisomerase (atp-hydrolyzing) subunit bMADE_RS00020O51859+3968 - 638890423.5
hypothetical proteinMADE_RS00025Not Available-6598 - 704116170.3
glycine--trna ligase subunit betaMADE_RS00030B4S277-7124 - 920275718.2
glycine--trna ligase subunit alphaMADE_RS00035B4S278-9205 - 1011034514.0
dna-3-methyladenine glycosylase iMADE_RS00040P05100+10256 - 1086423249.7
duf2489 domain-containing proteinMADE_RS00045Not Available-10951 - 1141817320.1
der gtpase-activating protein yihiMADE_RS00050A0KEY2-11437 - 1194019021.5
class i sam-dependent methyltransferaseMADE_RS00055Not Available-12068 - 1260120134.0

Displaying genes 1 – 10 of 3985 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

232 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da
BASm0001777(11Z)-octadecenoateC18H33O2Chemical structure of (11Z)-octadecenoateNot available
Average281.461Da
Monoisotopic281.2486039Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001785(2R,3R)-tartrateC4H6O6Chemical structure of (2R,3R)-tartrate87-69-4
Average150.0868Da
Monoisotopic150.0164379Da
BASm0001795pentanoateC5H9O2Chemical structure of pentanoateNot available
Average101.126Da
Monoisotopic101.0608031Da
BASm0001833(9Z)-hexadecenoateC16H29O2Chemical structure of (9Z)-hexadecenoateNot available
Average253.4003Da
Monoisotopic253.2167552Da
BASm0001842(5Z,8Z,11Z,14Z)-eicosatetraenoateC20H31O2Chemical structure of (5Z,8Z,11Z,14Z)-eicosatetraenoateNot available
Average303.467Da
Monoisotopic303.2329538Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da

Displaying 31–40 of 232 metabolites