Alteromonas mediterranea DE

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Alteromonas

Description

Alteromonas mediterranea DE is a Gram-negative, rod-shaped bacterium that thrives in aquatic environments. As a heterotrophic organism, it obtains its energy through the consumption of organic compounds, which is characteristic of many marine bacteria. This organism is strictly aerobic, indicating that it requires oxygen for its metabolic processes. The ecological role of Alteromonas mediterranea DE may be significant in nutrient cycling within its aquatic habitat, as its heterotrophic nature enables it to contribute to the degradation of organic matter, thereby influencing the availability of nutrients for other microorganisms and higher trophic levels. Its presence in marine ecosystems may also reflect its adaptation to specific environmental conditions, such as varying levels of organic material and oxygen availability, which could impact community dynamics in these habitats. Understanding the metabolic capabilities and ecological contributions of Alteromonas mediterranea DE could provide valuable insights into microbial processes in marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusAlteromonas
SpeciesAlteromonas mediterranea
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Alteromonas mediterranea DE
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Alteromonas mediterranea DE

Accession NumberNC_011138.3

Gene Summary

Adenine Count

1237137 bp

Thymine Count

1232999 bp

Guanine Count

1007649 bp

Cytosine Count

1002890 bp

Genome Length

4480937 bp

Protein-coding Genes

3903 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna polymerase iii subunit betaMADE_RS00010P22838+1659 - 275940911.7
dna replication/repair protein recfMADE_RS00015Q15ZZ5+2871 - 395940994.7
dna topoisomerase (atp-hydrolyzing) subunit bMADE_RS00020O51859+3968 - 638890423.5
hypothetical proteinMADE_RS00025Not Available-6598 - 704116170.3
glycine--trna ligase subunit betaMADE_RS00030B4S277-7124 - 920275718.2
glycine--trna ligase subunit alphaMADE_RS00035B4S278-9205 - 1011034514.0
dna-3-methyladenine glycosylase iMADE_RS00040P05100+10256 - 1086423249.7
duf2489 domain-containing proteinMADE_RS00045Not Available-10951 - 1141817320.1
der gtpase-activating protein yihiMADE_RS00050A0KEY2-11437 - 1194019021.5
class i sam-dependent methyltransferaseMADE_RS00055Not Available-12068 - 1260120134.0

Displaying genes 1 – 10 of 3985 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

232 records
Metabolite IDMetabolite nameStructureCAS number
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001362octadecanoateC18H35O2Chemical structure of octadecanoateNot available
Average283.4693Da
Monoisotopic283.263705364Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001767oxalateC2O4Chemical structure of oxalateNot available
Average88.019Da
Monoisotopic87.979658488Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da

Displaying 21–30 of 232 metabolites