Rhizobium sp. R693

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. R693 is a rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This species is notable for having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The accession number for Rhizobium sp. R693 is LOKY00000000.1, which provides a reference for further genetic and genomic studies. As a member of the Rhizobium genus, this bacterium is likely to engage in symbiotic relationships with leguminous plants, promoting nitrogen fixation, a critical process for enhancing soil fertility and supporting plant growth. The rod shape and motility may play significant roles in its ability to colonize root nodules effectively, where it forms symbiotic associations with host plants. Understanding the characteristics of Rhizobium sp. R693 contributes to the broader knowledge of microbial ecology and the roles of bacteria in agricultural systems. Such insights can inform practices in sustainable agriculture, particularly in optimizing nitrogen input through biological means, thereby reducing reliance on synthetic fertilizers.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. R693
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. R693
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. R693 R693_NODE_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1251366 bp

Thymine Count

1243259 bp

Guanine Count

1840742 bp

Cytosine Count

1849468 bp

Genome Length

6184835 bp

Protein-coding Genes

5730 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ohcu decarboxylaseATY79_17280Not AvailableNegative776927 - 77742418432.7
allantoinaseATY79_17285Not AvailableNegative777424 - 77834735205.7
hypothetical proteinATY79_17290Not AvailableNegative778447 - 77916926842.6
d-amino-acid oxidaseATY79_17295Not AvailableNegative779283 - 78046141967.3
5-methylaminomethyl-2-thiouridine methyltransferaseATY79_17300Not AvailablePositive780460 - 78117626638.3
nucleotidyltransferaseATY79_17305Not AvailableNegative781346 - 78228136062.1
hybrid sensor histidine kinase/response regulatorATY79_17310Not AvailableNegative782754 - 785597104766.0
rna helicaseATY79_17315Not AvailablePositive786598 - 78826560847.7
lactoylglutathione lyaseATY79_17320Not AvailablePositive788471 - 78911224315.0
peptide abc transporter atp-binding proteinATY79_17325Not AvailableNegative789109 - 79001732310.7

Displaying genes 731 – 740 of 5783 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.