cyanobacterium endosymbiont of Rhopalodia gibberula

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Order

Family

Genus

Description

Cyanobacterium endosymbiont of Rhopalodia gibberula is characterized by having a single replicon, which is indicative of its genomic structure. The organism is cataloged under the accession number NZ_AP018341.1, providing a reference point for researchers interested in its genetic material. This cyanobacterial endosymbiont plays a significant role in the ecology of Rhopalodia gibberula, a diatom that is known to inhabit freshwater environments. The endosymbiotic relationship suggests that the cyanobacterium may contribute to the photosynthetic capabilities of its host, enabling it to harness sunlight and produce organic compounds essential for growth and survival. Such interactions are vital in aquatic ecosystems, where diatoms serve as primary producers and are integral to the food web. The presence of a cyanobacterial endosymbiont within Rhopalodia gibberula exemplifies the importance of symbiotic relationships in promoting biodiversity and sustaining ecological balance. The specific traits of this endosymbiont, including its single replicon, highlight the evolutionary adaptations that facilitate the coexistence of these organisms in their respective environments. Understanding these dynamics can further our knowledge of microbial interactions and their implications for ecosystem health.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cyanobacterium endosymbiont of Rhopalodia gibberula isolate

Gene Summary

Adenine Count

998535 bp

Thymine Count

996853 bp

Guanine Count

512062 bp

Cytosine Count

512859 bp

Genome Length

3020309 bp

Protein-coding Genes

1978 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mapeg family proteinRGRSB_RS04130Not AvailableNegative1287661 - 128807715580.3
hypothetical proteinRGRSB_RS10045Not AvailablePositive1288241 - 12883784825.13
hemolysin family proteinRGRSB_RS04135Not AvailablePositive1288529 - 128956338483.2
Trna-tyrNot AvailableNot AvailablePositive1289632 - 1289716Not Available
Trna-thrNot AvailableNot AvailablePositive1289796 - 1289867Not Available
duf6737 family proteinRGRSB_RS04150Not AvailableNegative1290032 - 12902569101.34
methylmalonic aciduria and homocystinuria type d proteinRGRSB_RS04155Not AvailablePositive1290878 - 129139319776.0
hopanoid biosynthesis associated radical sam protein hpnjRGRSB_RS04160Not AvailableNegative1291551 - 129299054292.1
aldehyde oxygenase (deformylating)RGRSB_RS04165Not AvailablePositive1294627 - 129532226193.1
excinuclease abc subunit uvraRGRSB_RS04170Not AvailableNegative1296465 - 1299326106430.0

Displaying genes 841 – 850 of 2023 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.