Sphingobium sp. MP9-4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. MP9-4 is a bacterium characterized by the presence of flagella, which suggests a degree of motility. It possesses a single replicon, indicating a streamlined genomic structure that could be advantageous for its adaptability and replication. The organism is cataloged under the accession number LUFI00000000.1, which provides a reference for its genetic information in biological databases. The presence of flagella in Sphingobium sp. MP9-4 may facilitate its movement through various environments, which is particularly relevant for its ecological interactions and potential roles in biogeochemical cycles. The ability to navigate its surroundings could enhance its capacity to colonize specific niches or respond to environmental stimuli, ultimately influencing its survival and ecological success. In summary, Sphingobium sp. MP9-4, with its motility and genomic characteristics, exemplifies adaptations that may be crucial for its ecological niche and interactions within microbial communities. Understanding these traits can provide insights into the ecological dynamics and functional roles of Sphingobium species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. MP9-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. MP9-4 contig-123_99, whole genome shotgun

Gene Summary

Adenine Count

967388 bp

Thymine Count

963695 bp

Guanine Count

1729849 bp

Cytosine Count

1734388 bp

Genome Length

5395320 bp

Protein-coding Genes

4848 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate 5-dehydrogenaseA0U87_23045Not AvailablePositive4264822 - 426567630322.3
fructose-bisphosphataseA0U87_23050Not AvailablePositive4265707 - 426670236626.2
conjugal transfer protein traaA0U87_23055Not AvailableNegative4268817 - 4271720106411.0
conjugal transfer protein tradA0U87_23060Not AvailablePositive4272235 - 42724568453.49
nucleotidyltransferaseA0U87_23065Not AvailableNegative4272658 - 427358735818.8
hypothetical proteinA0U87_23070Not AvailableNegative4273648 - 42738969932.17
transposaseA0U87_23075Not AvailablePositive4274121 - 427439910688.9
integraseA0U87_23080Not AvailablePositive4274432 - 427529833068.7
hypothetical proteinA0U87_23085Not AvailableNegative4276174 - 42764169013.39
hypothetical proteinA0U87_23090Not AvailableNegative4276568 - 427694513005.5

Displaying genes 3921 – 3930 of 4932 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.