Sphingobium sp. MP9-4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. MP9-4 is a bacterium characterized by the presence of flagella, which suggests a degree of motility. It possesses a single replicon, indicating a streamlined genomic structure that could be advantageous for its adaptability and replication. The organism is cataloged under the accession number LUFI00000000.1, which provides a reference for its genetic information in biological databases. The presence of flagella in Sphingobium sp. MP9-4 may facilitate its movement through various environments, which is particularly relevant for its ecological interactions and potential roles in biogeochemical cycles. The ability to navigate its surroundings could enhance its capacity to colonize specific niches or respond to environmental stimuli, ultimately influencing its survival and ecological success. In summary, Sphingobium sp. MP9-4, with its motility and genomic characteristics, exemplifies adaptations that may be crucial for its ecological niche and interactions within microbial communities. Understanding these traits can provide insights into the ecological dynamics and functional roles of Sphingobium species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. MP9-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. MP9-4 contig-123_99, whole genome shotgun

Gene Summary

Adenine Count

967388 bp

Thymine Count

963695 bp

Guanine Count

1729849 bp

Cytosine Count

1734388 bp

Genome Length

5395320 bp

Protein-coding Genes

4848 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxinA0U87_02895Not AvailableNegative2593309 - 259362611058.8
succinyl-coa--3-ketoacid-coa transferaseA0U87_02900Not AvailableNegative2593641 - 259428822207.1
succinyl-coa--3-ketoacid-coa transferaseA0U87_02905Not AvailableNegative2594288 - 259499525735.8
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenaseA0U87_02910Not AvailableNegative2595009 - 259579427036.5
benzoate 1,2-dioxygenase small subunitA0U87_02915Not AvailableNegative2595806 - 259632120083.6
benzoate 1,2-dioxygenase large subunitA0U87_02920Not AvailableNegative2596318 - 259767951234.3
catechol 1,2-dioxygenaseA0U87_02925Not AvailableNegative2597694 - 259862033436.9
muconolactone delta-isomeraseA0U87_02930Not AvailableNegative2598659 - 259894910985.3
muconate cycloisomeraseA0U87_02935Not AvailableNegative2598955 - 260011240216.6
lysr family transcriptional regulatorA0U87_02940Not AvailablePositive2600224 - 260114734395.8

Displaying genes 2411 – 2420 of 4932 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.