Sphingobium sp. MP9-4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. MP9-4 is a bacterium characterized by the presence of flagella, which suggests a degree of motility. It possesses a single replicon, indicating a streamlined genomic structure that could be advantageous for its adaptability and replication. The organism is cataloged under the accession number LUFI00000000.1, which provides a reference for its genetic information in biological databases. The presence of flagella in Sphingobium sp. MP9-4 may facilitate its movement through various environments, which is particularly relevant for its ecological interactions and potential roles in biogeochemical cycles. The ability to navigate its surroundings could enhance its capacity to colonize specific niches or respond to environmental stimuli, ultimately influencing its survival and ecological success. In summary, Sphingobium sp. MP9-4, with its motility and genomic characteristics, exemplifies adaptations that may be crucial for its ecological niche and interactions within microbial communities. Understanding these traits can provide insights into the ecological dynamics and functional roles of Sphingobium species in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. MP9-4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. MP9-4 contig-123_99, whole genome shotgun

Gene Summary

Adenine Count

967388 bp

Thymine Count

963695 bp

Guanine Count

1729849 bp

Cytosine Count

1734388 bp

Genome Length

5395320 bp

Protein-coding Genes

4848 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
di-trans,poly-cis-decaprenylcistransferaseA0U87_02465Not AvailablePositive1739541 - 174028127107.6
phosphatidate cytidylyltransferaseA0U87_02470Not AvailablePositive1740287 - 174106326803.9
1-deoxy-d-xylulose-5-phosphate reductoisomeraseA0U87_02475Not AvailablePositive1741063 - 174222039573.8
rip metalloprotease rsepA0U87_02480Not AvailablePositive1742217 - 174335040612.0
outer membrane protein assembly factor bamaA0U87_02485Not AvailablePositive1743439 - 174607597563.2
hypothetical proteinA0U87_02490Not AvailablePositive1746075 - 174674322816.2
beta-hydroxyacyl-acp dehydrataseA0U87_02495Not AvailablePositive1746748 - 174722717071.1
50s ribosomal protein l31A0U87_02500Not AvailablePositive1747342 - 17475668269.71
3-dehydroquinate synthaseA0U87_02505Not AvailableNegative1747885 - 174899439176.0
shikimate kinaseA0U87_02510Not AvailableNegative1748985 - 174953320116.4

Displaying genes 1611 – 1620 of 4932 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.