Paraburkholderia caffeinilytica

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caffeinilytica is a rod-shaped bacterium notable for its possession of flagella, which likely contributes to its motility. This organism is characterized by having two replicons, indicating a complex genomic structure that may facilitate various metabolic processes. The genomic data for Paraburkholderia caffeinilytica can be accessed through the following accession numbers: NZ_CP031468.1 and NZ_CP031467.1. This bacterium is of particular interest due to its potential ecological roles, especially in environments where caffeine is present. Paraburkholderia caffeinilytica is known for its ability to degrade caffeine, making it a candidate for bioremediation efforts in contaminated sites. Its metabolic capabilities could play a significant role in the cycling of nitrogen and carbon in ecosystems where caffeine from various sources, such as coffee waste, is prevalent. The presence of flagella suggests that Paraburkholderia caffeinilytica is capable of active movement toward substrates, which may enhance its efficiency in colonizing environments rich in organic material. Its dual-replicon system may provide advantages in adaptability and survival under varying environmental conditions. Overall, the characteristics of Paraburkholderia caffeinilytica highlight its potential ecological significance in biogeochemical processes and waste management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caffeinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caffeinilytica strain CF1 plasmid p1, complete

Gene Summary

Adenine Count

36937 bp

Thymine Count

36047 bp

Guanine Count

50251 bp

Cytosine Count

51356 bp

Genome Length

174591 bp

Protein-coding Genes

152 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
porinDSC91_RS36030Not AvailablePositive4429377 - 443056141305.9
laci family dna-binding transcriptional regulatorDSC91_RS36035Not AvailableNegative4430710 - 443175038408.6
phytanoyl-coa dioxygenase family proteinDSC91_RS36040Not AvailablePositive4431845 - 443303844735.6
lysr family transcriptional regulatorDSC91_RS36045Not AvailablePositive4433236 - 443415034038.4
intradiol ring-cleavage dioxygenaseDSC91_RS36050Not AvailablePositive4434381 - 443522031189.9
sugar phosphate isomerase/epimerase family proteinDSC91_RS36055Not AvailablePositive4435323 - 443620431929.0
inositol 2-dehydrogenaseDSC91_RS36060Not AvailablePositive4436246 - 443723836221.5
gfo/idh/moca family proteinDSC91_RS36065Not AvailablePositive4437263 - 443835139449.7
multiple monosaccharide abc transporter substrate-binding proteinDSC91_RS36070Not AvailablePositive4438448 - 443951838350.6
multiple monosaccharide abc transporter atp-binding proteinDSC91_RS36075Not AvailablePositive4439613 - 444114255311.3

Displaying genes 4141 – 4150 of 4231 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.