Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis sp. HIX |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
810878 bp
Thymine Count
807339 bp
Guanine Count
1614557 bp
Cytosine Count
1633703 bp
Genome Length
4866477 bp
Protein-coding Genes
4397 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | ATE62_05620 | Q1GPI7 | Negative | 1217787 - 1218593 | 28441.1 |
| hypothetical protein | ATE62_05625 | P44116 | Negative | 1218628 - 1219053 | 16245.4 |
| diguanylate cyclase | ATE62_05630 | Q9ABX9 | Negative | 1219126 - 1220754 | 58826.0 |
| rna-binding protein | ATE62_05635 | P0AGD9 | Positive | 1221001 - 1222473 | 51168.1 |
| 30s ribosomal protein s16 | ATE62_05640 | A5V9P7 | Positive | 1222521 - 1223210 | 23743.0 |
| ribosome maturation factor rimm | ATE62_05645 | Q1GPJ1 | Positive | 1223214 - 1223723 | 17638.2 |
| penicillin-binding protein | ATE62_05650 | Q5HDB2 | Positive | 1224221 - 1225729 | 53903.6 |
| hypothetical protein | ATE62_05655 | Not Available | Negative | 1225726 - 1226973 | 44474.6 |
| hypothetical protein | ATE62_05660 | Not Available | Negative | 1227135 - 1227419 | 10514.7 |
| lysr family transcriptional regulator | ATE62_05665 | Not Available | Positive | 1227522 - 1228445 | 33933.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
