Pseudomonas sp. DY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. DY-1 is characterized by having two replicons, which indicates a complex genetic structure that may contribute to its adaptability and metabolic versatility. This strain is cataloged under two specific accession numbers: NZ_CP032616.1 and NZ_CP032615.1, which provide a reference for its genomic sequences in biological databases. The presence of two replicons in Pseudomonas sp. DY-1 suggests that it may possess a unique ability to regulate different sets of genes independently, potentially enabling it to thrive in diverse environmental conditions. This genetic architecture might enhance its survival capabilities in various niches, allowing for efficient utilization of available resources. The ecological insights derived from the traits of Pseudomonas sp. DY-1 highlight its potential role in bioremediation and nutrient cycling. Given the known versatility of Pseudomonas species in degrading pollutants and contributing to soil health, Pseudomonas sp. DY-1 may play a significant role in environmental microbiology, especially in environments affected by contaminants. Its genomic characteristics could provide a foundation for further studies aimed at harnessing its abilities for biotechnological applications. Thus, Pseudomonas sp. DY-1 exemplifies the importance of genetic diversity in microbial adaptation and ecological functionality.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. DY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. DY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. DY-1 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5402 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf5924 family proteinD6Z43_RS19665Not AvailablePositive4170319 - 417136239191.2
nucleoside recognition domain-containing proteinD6Z43_RS19670Not AvailableNegative4171465 - 417269143007.9
glutamate/aspartate:proton symporter gltpD6Z43_RS19675Not AvailableNegative4172874 - 417420547395.6
nad(p)h:quinone oxidoreductaseD6Z43_RS19680Not AvailablePositive4174513 - 417510920949.1
inhibitor of vertebrate lysozyme family proteinD6Z43_RS19685Not AvailableNegative4175422 - 417588617407.3
duf1328 domain-containing proteinD6Z43_RS19690Not AvailableNegative4175897 - 41760585524.24
hypothetical proteinD6Z43_RS28420Not AvailableNegative4176084 - 41762184596.78
hypothetical proteinD6Z43_RS19695Not AvailableNegative4176239 - 41764788976.93
sigma-54-dependent response regulator transcription factor algbD6Z43_RS19700Not AvailablePositive4176929 - 417827549244.9
kinb sensor domain-containing domainD6Z43_RS19705Not AvailablePositive4178289 - 418006466124.3

Displaying genes 3941 – 3950 of 5607 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.