Pseudomonas sp. DY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. DY-1 is characterized by having two replicons, which indicates a complex genetic structure that may contribute to its adaptability and metabolic versatility. This strain is cataloged under two specific accession numbers: NZ_CP032616.1 and NZ_CP032615.1, which provide a reference for its genomic sequences in biological databases. The presence of two replicons in Pseudomonas sp. DY-1 suggests that it may possess a unique ability to regulate different sets of genes independently, potentially enabling it to thrive in diverse environmental conditions. This genetic architecture might enhance its survival capabilities in various niches, allowing for efficient utilization of available resources. The ecological insights derived from the traits of Pseudomonas sp. DY-1 highlight its potential role in bioremediation and nutrient cycling. Given the known versatility of Pseudomonas species in degrading pollutants and contributing to soil health, Pseudomonas sp. DY-1 may play a significant role in environmental microbiology, especially in environments affected by contaminants. Its genomic characteristics could provide a foundation for further studies aimed at harnessing its abilities for biotechnological applications. Thus, Pseudomonas sp. DY-1 exemplifies the importance of genetic diversity in microbial adaptation and ecological functionality.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. DY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. DY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. DY-1 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5402 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-cysteine desulfhydraseD6Z43_RS19160Not AvailablePositive4059627 - 406062834639.7
cystine abc transporter substrate-binding proteinD6Z43_RS19165Not AvailablePositive4060740 - 406153728845.6
cystine abc transporter permeaseD6Z43_RS19170Not AvailablePositive4061534 - 406220224422.3
l-cystine abc transporter atp-binding protein tcynD6Z43_RS19175Not AvailablePositive4062202 - 406294827203.3
mfs transporterD6Z43_RS19180Not AvailablePositive4063307 - 406449441276.6
nuclear transport factor 2 family proteinD6Z43_RS19185Not AvailablePositive4064619 - 406499314103.6
sigma 54-interacting transcriptional regulatorD6Z43_RS19190Not AvailableNegative4065034 - 406595433403.9
rbbp9/yden family alpha/beta hydrolaseD6Z43_RS19195Not AvailableNegative4066023 - 406660421467.3
lysr substrate-binding domain-containing proteinD6Z43_RS19200Not AvailablePositive4066819 - 406773634164.4
malonate transporter subunit madmD6Z43_RS19205Not AvailableNegative4067785 - 406854925603.0

Displaying genes 3841 – 3850 of 5607 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.