Pseudomonas sp. DY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. DY-1 is characterized by having two replicons, which indicates a complex genetic structure that may contribute to its adaptability and metabolic versatility. This strain is cataloged under two specific accession numbers: NZ_CP032616.1 and NZ_CP032615.1, which provide a reference for its genomic sequences in biological databases. The presence of two replicons in Pseudomonas sp. DY-1 suggests that it may possess a unique ability to regulate different sets of genes independently, potentially enabling it to thrive in diverse environmental conditions. This genetic architecture might enhance its survival capabilities in various niches, allowing for efficient utilization of available resources. The ecological insights derived from the traits of Pseudomonas sp. DY-1 highlight its potential role in bioremediation and nutrient cycling. Given the known versatility of Pseudomonas species in degrading pollutants and contributing to soil health, Pseudomonas sp. DY-1 may play a significant role in environmental microbiology, especially in environments affected by contaminants. Its genomic characteristics could provide a foundation for further studies aimed at harnessing its abilities for biotechnological applications. Thus, Pseudomonas sp. DY-1 exemplifies the importance of genetic diversity in microbial adaptation and ecological functionality.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. DY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. DY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. DY-1 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5402 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfate adenylyltransferase subunit cysdD6Z43_RS14600Not AvailableNegative3096368 - 309728535408.6
lytic murein transglycosylase bD6Z43_RS14605Not AvailablePositive3097620 - 309871741078.0
nif3-like dinuclear metal center hexameric proteinD6Z43_RS14610Not AvailableNegative3098766 - 309952427320.6
do family serine endopeptidase algwD6Z43_RS14615Not AvailablePositive3099636 - 310078740850.1
tonb-dependent siderophore receptorD6Z43_RS14620Not AvailablePositive3100916 - 310301576988.2
duf4198 domain-containing proteinD6Z43_RS14625Not AvailablePositive3103028 - 310375626242.3
histidinol-phosphate transaminaseD6Z43_RS14630Not AvailableNegative3103821 - 310487338465.1
histidinol dehydrogenaseD6Z43_RS14635Not AvailableNegative3104876 - 310618946863.8
atp phosphoribosyltransferaseD6Z43_RS14640Not AvailableNegative3106312 - 310694722881.1
udp-n-acetylglucosamine 1-carboxyvinyltransferaseD6Z43_RS14645Not AvailableNegative3107037 - 310830244636.6

Displaying genes 2981 – 2990 of 5607 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.