Pseudomonas sp. DY-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. DY-1 is characterized by having two replicons, which indicates a complex genetic structure that may contribute to its adaptability and metabolic versatility. This strain is cataloged under two specific accession numbers: NZ_CP032616.1 and NZ_CP032615.1, which provide a reference for its genomic sequences in biological databases. The presence of two replicons in Pseudomonas sp. DY-1 suggests that it may possess a unique ability to regulate different sets of genes independently, potentially enabling it to thrive in diverse environmental conditions. This genetic architecture might enhance its survival capabilities in various niches, allowing for efficient utilization of available resources. The ecological insights derived from the traits of Pseudomonas sp. DY-1 highlight its potential role in bioremediation and nutrient cycling. Given the known versatility of Pseudomonas species in degrading pollutants and contributing to soil health, Pseudomonas sp. DY-1 may play a significant role in environmental microbiology, especially in environments affected by contaminants. Its genomic characteristics could provide a foundation for further studies aimed at harnessing its abilities for biotechnological applications. Thus, Pseudomonas sp. DY-1 exemplifies the importance of genetic diversity in microbial adaptation and ecological functionality.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. DY-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. DY-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. DY-1 chromosome, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5402 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transglycosylase domain-containing proteinD6Z43_RS11725Not AvailablePositive2467971 - 2471078116154.0
dmt family transporterD6Z43_RS11730Not AvailableNegative2471310 - 247161510857.9
fmn-dependent nadh-azoreductaseD6Z43_RS11735Not AvailableNegative2471626 - 247226423358.7
lysr substrate-binding domain-containing proteinD6Z43_RS11740Not AvailablePositive2472402 - 247328332058.3
multidrug/spermidine efflux smr transporter subunit mdtjD6Z43_RS11745Not AvailablePositive2473659 - 247401512742.2
multidrug/spermidine efflux smr transporter subunit mdtiD6Z43_RS11750Not AvailablePositive2474012 - 247434111538.7
sigma-54-dependent transcriptional regulatorD6Z43_RS11755Not AvailableNegative2474639 - 247619856849.2
phenylalanine 4-monooxygenaseD6Z43_RS11760Not AvailablePositive2476458 - 247724930204.5
4a-hydroxytetrahydrobiopterin dehydrataseD6Z43_RS11765Not AvailablePositive2477358 - 247771413296.7
amino acid aminotransferaseD6Z43_RS11770Not AvailablePositive2477711 - 247890442601.3

Displaying genes 2401 – 2410 of 5607 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.