Agrobacterium salinitolerans

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Agrobacterium salinitolerans is a rod-shaped bacterium with a significant adaptation to saline environments. The presence of flagella indicates that it is motile, which may play a role in its ability to navigate through its habitat effectively. This bacterium is characterized by having a single replicon, indicating a streamlined genetic structure. The genetic information for Agrobacterium salinitolerans is accessible through its accession number, POYI00000000.1, which provides a reference point for researchers interested in studying its genetic makeup and related functionalities. The ability of Agrobacterium salinitolerans to tolerate saline conditions is of particular interest, as it suggests potential applications in agricultural biotechnology. Understanding its mechanisms of salinity tolerance could lead to advancements in the development of crops that can thrive in saline soils, which are becoming increasingly prevalent due to factors such as climate change and poor land management practices. In summary, Agrobacterium salinitolerans is a motile, rod-shaped bacterium with a single replicon, known for its tolerance to salinity. Its adaptations to saline environments may offer insights into agricultural practices that could enhance crop resilience in challenging conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. YIC5082
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium salinitolerans
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. YIC5082 C181, whole genome shotgun sequence.

Gene Summary

Adenine Count

1013375 bp

Thymine Count

1017068 bp

Guanine Count

1479017 bp

Cytosine Count

1480953 bp

Genome Length

4990461 bp

Protein-coding Genes

4582 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator mrazC2E26_02105Not AvailablePositive427388 - 42782816115.3
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhC2E26_02110Not AvailablePositive427843 - 42886836300.6
hypothetical proteinC2E26_02115Not AvailablePositive428870 - 42942719679.8
penicillin-binding protein 2C2E26_02120Not AvailablePositive429427 - 43116962887.6
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseC2E26_02125Not AvailablePositive431227 - 43269651397.4
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseC2E26_02130Not AvailablePositive432693 - 43412650721.0
phospho-n-acetylmuramoyl-pentapeptide- transferaseC2E26_02135Not AvailablePositive434150 - 43525039143.1
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseC2E26_02140Not AvailablePositive435254 - 43666348916.3
putative lipid ii flippase ftswC2E26_02145Not AvailablePositive436668 - 43782242401.0
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseC2E26_02150Not AvailablePositive437829 - 43896539149.1

Displaying genes 431 – 440 of 4650 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.