Agrobacterium salinitolerans

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Agrobacterium salinitolerans is a rod-shaped bacterium with a significant adaptation to saline environments. The presence of flagella indicates that it is motile, which may play a role in its ability to navigate through its habitat effectively. This bacterium is characterized by having a single replicon, indicating a streamlined genetic structure. The genetic information for Agrobacterium salinitolerans is accessible through its accession number, POYI00000000.1, which provides a reference point for researchers interested in studying its genetic makeup and related functionalities. The ability of Agrobacterium salinitolerans to tolerate saline conditions is of particular interest, as it suggests potential applications in agricultural biotechnology. Understanding its mechanisms of salinity tolerance could lead to advancements in the development of crops that can thrive in saline soils, which are becoming increasingly prevalent due to factors such as climate change and poor land management practices. In summary, Agrobacterium salinitolerans is a motile, rod-shaped bacterium with a single replicon, known for its tolerance to salinity. Its adaptations to saline environments may offer insights into agricultural practices that could enhance crop resilience in challenging conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. YIC5082
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium salinitolerans
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. YIC5082 C181, whole genome shotgun sequence.

Gene Summary

Adenine Count

1013375 bp

Thymine Count

1017068 bp

Guanine Count

1479017 bp

Cytosine Count

1480953 bp

Genome Length

4990461 bp

Protein-coding Genes

4582 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseC2E26_05185Not AvailableNegative1032534 - 103366140079.5
methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfoC2E26_05190Not AvailableNegative1033812 - 103525751785.8
duf1127 domain-containing proteinC2E26_05195Not AvailableNegative1035790 - 10359335468.56
duf1127 domain-containing proteinC2E26_05200Not AvailableNegative1036413 - 10365926956.6
Trna-leuNot AvailableNot AvailablePositive1037198 - 1037280Not Available
trigger factorC2E26_05215Not AvailablePositive1037509 - 103898754056.9
nucleoside kinaseC2E26_05220Not AvailablePositive1039194 - 103973320184.9
hypothetical proteinC2E26_05225Not AvailablePositive1039984 - 104063423350.7
si-specific nad(p)(+) transhydrogenaseC2E26_05230Not AvailableNegative1040834 - 104223751474.1
duf1003 domain-containing proteinC2E26_05240Not AvailableNegative1042966 - 104349919997.2

Displaying genes 1031 – 1040 of 4650 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.