Candidatus Nitrospira nitrificans

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Nitrospira

Description

Candidatus Nitrospira nitrificans is a significant member of the Nitrospiraceae family, recognized for its role in the nitrogen cycle, particularly in nitrification. This organism is characterized by having a single replicon, which is essential for its genetic stability and replication. The complete genome of Candidatus Nitrospira nitrificans is accessible through the accession number CZPZ00000000.1, providing a basis for further genomic studies and comparisons with other nitrifying bacteria. Nitrification, the process in which ammonia is oxidized to nitrite and subsequently to nitrate, is crucial for nutrient cycling in various ecosystems, including aquatic and soil environments. Candidatus Nitrospira nitrificans specifically contributes to the oxidation of nitrite to nitrate, thus playing a vital role in the overall nitrogen transformation processes. The ecological insight into Candidatus Nitrospira nitrificans highlights its importance in maintaining soil fertility and water quality, as well as its potential implications in agricultural practices and wastewater treatment systems where efficient nitrogen removal is required. Understanding the biology and ecology of this microorganism can inform strategies for enhancing its activity in environments where nitrogen management is critical.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusNitrospira
SpeciesCandidatus Nitrospira nitrificans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrospira nitrificans, isolate COMA2 genome assembly,

Gene Summary

Adenine Count

894786 bp

Thymine Count

892345 bp

Guanine Count

1169697 bp

Cytosine Count

1160255 bp

Genome Length

4117083 bp

Protein-coding Genes

4464 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylglucosamine 1-carboxyvinyltransferaseCOMA2_50106Not AvailablePositive3299266 - 330053444975.9
atp phosphoribosyltransferaseCOMA2_50107Not AvailablePositive3300544 - 330124225593.1
histidinol dehydrogenaseCOMA2_50108Not AvailablePositive3301239 - 330252246121.7
conserved hypothetical proteinCOMA2_50110Not AvailablePositive3303405 - 33036268244.06
exported hypothetical proteinCOMA2_50112Not AvailablePositive3303747 - 33039657691.28
putative nucleotidyltransferase (fragment)COMA2_50113Not AvailableNegative3304326 - 33045297757.26
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with hisfCOMA2_50114Not AvailablePositive3304792 - 330540022172.7
conserved exported hypothetical proteinCOMA2_50115Not AvailablePositive3305397 - 330614026668.2
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomeraseCOMA2_50116Not AvailablePositive3306142 - 330686725767.5
imidazole glycerol phosphate synthase, catalytic subunit with hishCOMA2_50117Not AvailablePositive3306933 - 330771227824.3

Displaying genes 3661 – 3670 of 4511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.