Candidatus Nitrospira nitrificans

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Nitrospira

Description

Candidatus Nitrospira nitrificans is a significant member of the Nitrospiraceae family, recognized for its role in the nitrogen cycle, particularly in nitrification. This organism is characterized by having a single replicon, which is essential for its genetic stability and replication. The complete genome of Candidatus Nitrospira nitrificans is accessible through the accession number CZPZ00000000.1, providing a basis for further genomic studies and comparisons with other nitrifying bacteria. Nitrification, the process in which ammonia is oxidized to nitrite and subsequently to nitrate, is crucial for nutrient cycling in various ecosystems, including aquatic and soil environments. Candidatus Nitrospira nitrificans specifically contributes to the oxidation of nitrite to nitrate, thus playing a vital role in the overall nitrogen transformation processes. The ecological insight into Candidatus Nitrospira nitrificans highlights its importance in maintaining soil fertility and water quality, as well as its potential implications in agricultural practices and wastewater treatment systems where efficient nitrogen removal is required. Understanding the biology and ecology of this microorganism can inform strategies for enhancing its activity in environments where nitrogen management is critical.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusNitrospira
SpeciesCandidatus Nitrospira nitrificans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrospira nitrificans, isolate COMA2 genome assembly,

Gene Summary

Adenine Count

894786 bp

Thymine Count

892345 bp

Guanine Count

1169697 bp

Cytosine Count

1160255 bp

Genome Length

4117083 bp

Protein-coding Genes

4464 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative transcriptional regulator with hth domain (fragment)COMA2_30073Not AvailablePositive2692298 - 269316132480.0
hypothetical proteinCOMA2_30074Not AvailableNegative2693107 - 26932625483.54
type i restriction-modification system, restriction subunit r (fragment)COMA2_30075Not AvailablePositive2693158 - 269460654497.8
hypothetical proteinCOMA2_30076Not AvailablePositive2694540 - 269504319095.8
type i site-specific deoxyribonuclease, hsdr family (fragment)COMA2_30077Not AvailablePositive2695000 - 269621445185.7
conserved hypothetical proteinCOMA2_30078Not AvailablePositive2696211 - 269694228319.7
conserved exported hypothetical proteinCOMA2_30079Not AvailableNegative2697075 - 269751515396.2
uncharacterized aipm/hcit synthase family transferase aq_356COMA2_30080Not AvailablePositive2697568 - 269931363508.3
integration host factor subunit alphaCOMA2_30081Not AvailablePositive2699468 - 269974310155.4
transcriptional regulator, merr familyCOMA2_30082Not AvailablePositive2699934 - 270029614176.5

Displaying genes 2951 – 2960 of 4511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.