Streptomyces sp. AVP053U2

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces sp. AVP053U2 is characterized by the presence of flagella, which indicates its capability for motility. This trait can play a significant role in its ecological interactions, allowing the organism to navigate its environment and possibly access nutrients more effectively. The organism possesses a single replicon, which is a feature that may influence its genetic stability and replication processes. In Streptomyces species, the presence of a single replicon can be associated with streamlined genetic regulation and adaptability, which are critical for survival in diverse habitats. The genome of Streptomyces sp. AVP053U2 is accessible under the accession number LMTQ00000000.2, providing a resource for further genomic analysis and exploration of its functions. This genomic data could facilitate a deeper understanding of its metabolic pathways, ecological roles, and potential applications in biotechnology. In a broader biological context, Streptomyces species are known for their ability to produce antibiotics and other bioactive compounds. The motility conferred by flagella may enhance their competitive edge in soil environments, where they can colonize new niches and interact with other microorganisms. Thus, Streptomyces sp. AVP053U2 may contribute to the complex dynamics of microbial communities, influencing nutrient cycling and the overall health of ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. AVP053U2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces sp. AVP053U2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces sp. AVP053U2 APS67_contig000184, whole genome shotgun

Gene Summary

Adenine Count

1097255 bp

Thymine Count

1086851 bp

Guanine Count

2772628 bp

Cytosine Count

2802628 bp

Genome Length

7759417 bp

Protein-coding Genes

6663 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-trpNot AvailableNot AvailablePositive3080104 - 3080179Not Available
protein translocase subunit seceAPS67_002695Not AvailablePositive3080286 - 308057010438.9
hypothetical proteinAPS67_002696Not AvailablePositive3080652 - 308153631916.4
50s ribosomal protein l11APS67_002697Not AvailablePositive3081726 - 308216015224.6
50s ribosomal protein l1APS67_002698Not AvailablePositive3082245 - 308297025796.1
hypothetical proteinAPS67_002699Not AvailablePositive3083139 - 308410133984.0
50s ribosomal protein l10APS67_002700Not AvailablePositive3084465 - 308499518731.4
50s ribosomal protein l7/l12APS67_002701Not AvailablePositive3085111 - 308549113197.8
dna-directed rna polymerase subunit betaAPS67_002702Not AvailablePositive3086136 - 3089621128422.0
dna-directed rna polymerase subunit beta'APS67_002703Not AvailablePositive3089733 - 3093647145561.0

Displaying genes 2711 – 2720 of 6753 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

465 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000198tetracenomycin CC23H20O11Chemical structure of tetracenomycin CNot available
Average472.402Da
Monoisotopic472.100561464Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 465 metabolites

Health Effects

No health effects information available for this bacterium.