Pseudohalioglobus lutimaris str. HF004

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Halieaceae

Genus

Pseudohalioglobus

Description

Pseudohalioglobus lutimaris str. HF004 is a distinct bacterial strain characterized by its single replicon, which indicates a streamlined genomic structure. The strain is cataloged under the accession number PKUS00000000.1, serving as a reference for genomic studies and further research. In terms of ecological relevance, Pseudohalioglobus lutimaris str. HF004 is likely to inhabit specific environmental niches, although precise habitat information is not provided. The presence of a single replicon may suggest an efficient genomic adaptation to its ecological conditions, allowing for effective regulation of metabolic processes and survival strategies within its environment. Overall, the unique genomic characteristics of Pseudohalioglobus lutimaris str. HF004 highlight its potential role in microbial communities, where such adaptations may contribute to ecological functions, including nutrient cycling or interactions with other microorganisms. Further exploration of this strain could yield insights into its ecological impact and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyHalieaceae
GenusPseudohalioglobus
SpeciesPseudohalioglobus lutimaris
StrainHF004

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudohalioglobus lutimaris strain HF004 contig79, whole genome

Gene Summary

Adenine Count

992056 bp

Thymine Count

1002827 bp

Guanine Count

1344360 bp

Cytosine Count

1325584 bp

Genome Length

4664827 bp

Protein-coding Genes

4080 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bameC0039_04555Not AvailablePositive1073839 - 107423414351.8
rnfh family proteinC0039_04560Not AvailableNegative1074231 - 107453010865.9
ubiquinone-binding proteinC0039_04565Not AvailableNegative1074554 - 107498515745.9
sodium-dependent transporterC0039_04570Not AvailableNegative1074998 - 107635047946.1
ssra-binding protein smpbC0039_04575Not AvailablePositive1076458 - 107694018124.1
sulfite exporter taue/safe family proteinC0039_04580Not AvailableNegative1076979 - 107780028009.8
hdod domain-containing proteinC0039_04585Not AvailableNegative1078003 - 107893533859.5
Tmrna,resume consensus sequence (at 88): tatagttgccaacgacgaNot AvailableNot AvailablePositive1079148 - 1079537Not Available
Tmrna,resume consensus sequence (at 223): catagacgcgagacccgcNot AvailableNot AvailablePositive1079444 - 1079814Not Available
duf3883 domain-containing proteinC0039_04595Not AvailableNegative1080022 - 108132949776.3

Displaying genes 911 – 920 of 4127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.