Pseudohalioglobus lutimaris str. HF004

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Halieaceae

Genus

Pseudohalioglobus

Description

Pseudohalioglobus lutimaris str. HF004 is a distinct bacterial strain characterized by its single replicon, which indicates a streamlined genomic structure. The strain is cataloged under the accession number PKUS00000000.1, serving as a reference for genomic studies and further research. In terms of ecological relevance, Pseudohalioglobus lutimaris str. HF004 is likely to inhabit specific environmental niches, although precise habitat information is not provided. The presence of a single replicon may suggest an efficient genomic adaptation to its ecological conditions, allowing for effective regulation of metabolic processes and survival strategies within its environment. Overall, the unique genomic characteristics of Pseudohalioglobus lutimaris str. HF004 highlight its potential role in microbial communities, where such adaptations may contribute to ecological functions, including nutrient cycling or interactions with other microorganisms. Further exploration of this strain could yield insights into its ecological impact and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyHalieaceae
GenusPseudohalioglobus
SpeciesPseudohalioglobus lutimaris
StrainHF004

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudohalioglobus lutimaris strain HF004 contig79, whole genome

Gene Summary

Adenine Count

992056 bp

Thymine Count

1002827 bp

Guanine Count

1344360 bp

Cytosine Count

1325584 bp

Genome Length

4664827 bp

Protein-coding Genes

4080 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein gspeC0039_03795Not AvailableNegative895041 - 89655555065.3
type ii secretion system protein gspdC0039_03800Not AvailableNegative896555 - 89859173515.0
type ii secretion system protein gspcC0039_03805Not AvailableNegative898631 - 89968037932.9
hypothetical proteinC0039_03810Not AvailableNegative899837 - 9000196734.63
trna (guanosine(18)-2'-o)-methyltransferase trmhC0039_03815Not AvailableNegative900016 - 90071726119.1
carbonate dehydrataseC0039_03820Not AvailableNegative900769 - 90140123926.4
ggdef domain-containing proteinC0039_03825Not AvailableNegative901414 - 90255642070.8
hypothetical proteinC0039_03830Not AvailablePositive902709 - 9029639190.11
hypothetical proteinC0039_03835Not AvailablePositive902960 - 90383833138.6
yajq family cyclic di-gmp-binding proteinC0039_03840Not AvailableNegative903835 - 90431717823.2

Displaying genes 761 – 770 of 4127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.