Pseudohalioglobus lutimaris str. HF004

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Cellvibrionales

Family

Halieaceae

Genus

Pseudohalioglobus

Description

Pseudohalioglobus lutimaris str. HF004 is a distinct bacterial strain characterized by its single replicon, which indicates a streamlined genomic structure. The strain is cataloged under the accession number PKUS00000000.1, serving as a reference for genomic studies and further research. In terms of ecological relevance, Pseudohalioglobus lutimaris str. HF004 is likely to inhabit specific environmental niches, although precise habitat information is not provided. The presence of a single replicon may suggest an efficient genomic adaptation to its ecological conditions, allowing for effective regulation of metabolic processes and survival strategies within its environment. Overall, the unique genomic characteristics of Pseudohalioglobus lutimaris str. HF004 highlight its potential role in microbial communities, where such adaptations may contribute to ecological functions, including nutrient cycling or interactions with other microorganisms. Further exploration of this strain could yield insights into its ecological impact and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderCellvibrionales
FamilyHalieaceae
GenusPseudohalioglobus
SpeciesPseudohalioglobus lutimaris
StrainHF004

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudohalioglobus lutimaris strain HF004 contig79, whole genome

Gene Summary

Adenine Count

992056 bp

Thymine Count

1002827 bp

Guanine Count

1344360 bp

Cytosine Count

1325584 bp

Genome Length

4664827 bp

Protein-coding Genes

4080 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr03757 family integrating conjugative element proteinC0039_05180Not AvailableNegative1208558 - 120906118384.0
nucleaseC0039_05185Not AvailablePositive1209184 - 121001130939.4
conjugative transfer atpaseC0039_05190Not AvailableNegative1210031 - 1212751102370.0
tigr03751 family conjugal transfer lipoproteinC0039_05195Not AvailableNegative1212760 - 121320616563.0
tigr03752 family integrating conjugative element proteinC0039_05200Not AvailableNegative1213151 - 121458750033.9
tigr03749 family integrating conjugative element proteinC0039_05205Not AvailableNegative1214609 - 121541529317.1
tigr03746 family integrating conjugative element proteinC0039_05210Not AvailableNegative1215412 - 121608925601.7
tigr03750 family conjugal transfer proteinC0039_05215Not AvailableNegative1216061 - 121644113993.4
tigr03745 family integrating conjugative element membrane proteinC0039_05220Not AvailableNegative1216480 - 121685712911.0
tigr03758 family integrating conjugative element proteinC0039_05225Not AvailableNegative1216958 - 12171888240.22

Displaying genes 1031 – 1040 of 4127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.